RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 C11orf94C9JXX5 98 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 BCL2L11O43521 198 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 CRYZL1O95825 349 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 ZNF806P0C7X5 589 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 ERP29P30040 261 aaKnown RBP4.11□□□□□ -1.75
BRCA1-224ENST00000497488 GLRXP35754 106 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 SNRPFP62306 86 aaKnown RBP4.11□□□□□ -1.75
BRCA1-224ENST00000497488 CAV1Q03135 178 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 SPCS2Q15005 226 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 CCDC153Q494R4 210 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 RNF212Q495C1 297 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 IBA57Q5T440 356 aaKnown RBP4.11□□□□□ -1.75
BRCA1-224ENST00000497488 CYB5R2Q6BCY4 276 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 TOMM20LQ6UXN7 152 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 MKXQ8IYA7 352 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 OR10G2Q8NGC3 310 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 OR4A5Q8NH83 315 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 FRZBQ92765 325 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 DNAJC30Q96LL9 226 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 TRIB3Q96RU7 358 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 TSSK6Q9BXA6 273 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 PLA2G2FQ9BZM2 168 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 ACER3Q9NUN7 267 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 C21orf62Q9NYP8 219 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 GSKIPQ9P0R6 139 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 TAAR3PQ9P1P4 343 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 ZNRD1Q9P1U0 126 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 SSR3Q9UNL2 185 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 MRPS16Q9Y3D3 137 aaKnown RBP4.11□□□□□ -1.75
BRCA1-224ENST00000497488 CSAG2Q9Y5P2 127 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 WDFY4Q6ZS81 3184 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 KMT2EQ8IZD2 1858 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 PCSK5Q92824 1860 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 GSTZ1O43708 216 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-224ENST00000497488 ZNF682O95780 498 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 C8GP07360 202 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 LGALS1P09382 135 aaKnown RBP4.1□□□□□ -1.75
BRCA1-224ENST00000497488 OR10J4P0C629 311 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 HMGA1P17096 107 aaKnown RBP4.1□□□□□ -1.75
BRCA1-224ENST00000497488 CRABP2P29373 138 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 TPI1P60174 286 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 NCALDP61601 193 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 DEFA6Q01524 100 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 SP6Q3SY56 376 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 SAMD13Q5VXD3 122 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 KRTAP7-1Q8IUC3 87 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 FAM24BQ8N5W8 94 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 ST6GALNAC3Q8NDV1 305 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 GPR146Q96CH1 333 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 ZNF286AQ9HBT8 521 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 SPANXA1Q9NS26 97 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 KCNIP2Q9NS61 270 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 SLC23A2Q9UGH3 650 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 ZNF230Q9UIE0 474 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-224ENST00000497488 TTC28Q96AY4 2481 aa4.1□□□□□ -1.75
BRCA1-224ENST00000497488 COL4A2P08572 1712 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 DOCK6Q96HP0 2047 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 DOCK8Q8NF50 2099 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 hCG_1818297A0A087WSY0 165 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 IGHV3-43A0A0B4J1X8 118 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 IGKV1-12A0A0C4DH73 117 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 IZUMO1RA6ND01 250 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 SIGLEC16A6NMB1 481 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 A8MT66 165 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 H7C1C5 153 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 LST1O00453 97 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 IGKV1D-12P01611 117 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 OPRM1P35372 400 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 TGFBR1P36897 503 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 CXCL12P48061 93 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 GTF2A1P52655 376 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-224ENST00000497488 LCN6P62502 163 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 CCDC58Q4VC31 144 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 BRMS1LQ5PSV4 323 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 TIFABQ6ZNK6 161 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 WDR86Q86TI4 376 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 ZNF329Q86UD4 541 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 TMEM86AQ8N2M4 240 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 SLC22A24Q8N4F4 322 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 TMEM105Q8N8V8 129 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 RTN4IP1Q8WWV3 396 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-224ENST00000497488 CMBLQ96DG6 245 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 PYURFQ96I23 114 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 TBL1YQ9BQ87 522 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 SHANK2-AS3Q9BTD1 123 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 PBDC1Q9BVG4 233 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 COMMD5Q9GZQ3 224 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 GPR84Q9NQS5 396 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 MDFICQ9P1T7 246 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 ZNF222Q9UK12 451 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 CCL26Q9Y258 94 aa4.09□□□□□ -1.75
BRCA1-224ENST00000497488 TECTAO75443 2155 aa4.09□□□□□ -1.76
BRCA1-224ENST00000497488 IGHV3OR15-7A0A075B7D8 119 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 A0A1W2PQ67 120 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 A8MUN3 132 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 COX7A2LO14548 114 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 PFDN1O60925 122 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 NDUFC2O95298 119 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 HLA-DQB1P01920 261 aa4.08□□□□□ -1.76
BRCA1-224ENST00000497488 CD28P10747 220 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms