RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 TNFSF12O43508 249 aa12.51□□□□□ -0.41
TRAPPC3-207ENST00000497251 FXYD4P59646 89 aa12.51□□□□□ -0.41
TRAPPC3-207ENST00000497251 RAB2BQ8WUD1 216 aa12.51□□□□□ -0.41
TRAPPC3-207ENST00000497251 MOB3AQ96BX8 217 aa12.51□□□□□ -0.41
TRAPPC3-207ENST00000497251 FAM25AB3EWG3 89 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 FAM25CB3EWG5 89 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 FAM25GB3EWG6 89 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 PMP2P02689 132 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 CD5P06127 495 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 OR13C7P0DN81 318 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 RCVRNP35243 200 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 RFX2P48378 723 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 AADACL3Q5VUY0 350 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 SLC25A24Q6NUK1 477 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 ZNF818PQ6ZRF7 136 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 TMEM17Q86X19 198 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 SNX29P2Q8IUI4 249 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 LYSMD2Q8IV50 215 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 OR6F1Q8NGZ6 308 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 C15orf40Q8WUR7 153 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 LSM10Q969L4 123 aaKnown RBP12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 ZNF2Q9BSG1 426 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 NDUFA4L2Q9NRX3 87 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 C21orf62Q9NYP8 219 aa12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 F11RQ9Y624 299 aaKnown RBP12.5□□□□□ -0.41
TRAPPC3-207ENST00000497251 MARCH11A6NNE9 402 aa12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 SNAPC5O75971 98 aa12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 F2RP25116 425 aa12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 GNRHRP30968 328 aa12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 HRH1P35367 487 aa12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 TMBIM6P55061 237 aa12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 CLVS1Q8IUQ0 354 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 CMTM1Q8IZ96 169 aa12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 OR5B3Q8NH48 314 aa12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 TMEM56Q96MV1 263 aa12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 GPHA2Q96T91 129 aa12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 TSC22D3Q99576 134 aa12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 FAM212BQ9NTI7 297 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC3-207ENST00000497251 TRAV3A0A0B4J244 114 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 TEX50A0A1B0GTY4 177 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 OR2T8A6NH00 312 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 HLA-DMAP28067 261 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 RPL5P46777 297 aaKnown RBP12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 RELQ04864 619 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 WT1-ASQ06250 92 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 PMS2P11Q13670 270 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 SPCS2Q15005 226 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 DEFB135Q30KP9 77 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 OR51H1Q8NH63 302 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 GATAD1Q8WUU5 269 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 TXN2Q99757 166 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 MAP6D1Q9H9H5 199 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 EXTL2Q9UBQ6 330 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 PRNDQ9UKY0 176 aa12.48□□□□□ -0.41
TRAPPC3-207ENST00000497251 IGHV3-35A0A0C4DH35 117 aa12.47□□□□□ -0.41
TRAPPC3-207ENST00000497251 S1PR2O95136 353 aa12.47□□□□□ -0.41
TRAPPC3-207ENST00000497251 FCGR2BP31994 310 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC3-207ENST00000497251 ADMP35318 185 aa12.47□□□□□ -0.41
TRAPPC3-207ENST00000497251 ODF3L2Q3SX64 289 aa12.47□□□□□ -0.41
TRAPPC3-207ENST00000497251 OR10W1Q8NGF6 305 aa12.47□□□□□ -0.41
TRAPPC3-207ENST00000497251 SCARB1Q8WTV0 552 aa12.47□□□□□ -0.41
TRAPPC3-207ENST00000497251 MFFQ9GZY8 342 aa12.47□□□□□ -0.41
TRAPPC3-207ENST00000497251 FXYD6Q9H0Q3 95 aa12.47□□□□□ -0.41
TRAPPC3-207ENST00000497251 S100GP29377 79 aa12.46□□□□□ -0.41
TRAPPC3-207ENST00000497251 TCTAP57738 103 aa12.46□□□□□ -0.41
TRAPPC3-207ENST00000497251 LGALS9CQ6DKI2 356 aa12.46□□□□□ -0.41
TRAPPC3-207ENST00000497251 LPCAT3Q6P1A2 487 aa12.46□□□□□ -0.41
TRAPPC3-207ENST00000497251 OR1P1Q8NH06 330 aa12.46□□□□□ -0.41
TRAPPC3-207ENST00000497251 DGCR14Q96DF8 476 aaKnown RBP12.46□□□□□ -0.41
TRAPPC3-207ENST00000497251 C20orf24Q9BUV8 137 aa12.46□□□□□ -0.41
TRAPPC3-207ENST00000497251 CSTL1Q9H114 145 aa12.46□□□□□ -0.41
TRAPPC3-207ENST00000497251 CCDC59Q9P031 241 aaKnown RBP12.46□□□□□ -0.41
TRAPPC3-207ENST00000497251 SMPXQ9UHP9 88 aa12.46□□□□□ -0.41
TRAPPC3-207ENST00000497251 SELENOKQ9Y6D0 94 aa12.46□□□□□ -0.41
TRAPPC3-207ENST00000497251 GPR31O00270 319 aa12.45□□□□□ -0.42
TRAPPC3-207ENST00000497251 NUPL2O15504 423 aaKnown RBP12.45□□□□□ -0.42
TRAPPC3-207ENST00000497251 NOL3O60936 208 aaKnown RBP12.45□□□□□ -0.42
TRAPPC3-207ENST00000497251 PGLYRP1O75594 196 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC3-207ENST00000497251 TBPP20226 339 aa12.45□□□□□ -0.42
TRAPPC3-207ENST00000497251 TSPAN5P62079 268 aa12.45□□□□□ -0.42
TRAPPC3-207ENST00000497251 DYNC2LI1Q8TCX1 351 aa12.45□□□□□ -0.42
TRAPPC3-207ENST00000497251 OR10C1Q96KK4 312 aa12.45□□□□□ -0.42
TRAPPC3-207ENST00000497251 MIXL1Q9H2W2 232 aa12.45□□□□□ -0.42
TRAPPC3-207ENST00000497251 UBQLN2Q9UHD9 624 aa12.45□□□□□ -0.42
TRAPPC3-207ENST00000497251 OR51B2Q9Y5P1 312 aa12.45□□□□□ -0.42
TRAPPC3-207ENST00000497251 MPTX1A8MV57 137 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 K7EIM0 57 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 RGS5O15539 181 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 RLN1P04808 185 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 CTSGP08311 255 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 UCP3P55916 312 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 PAFAH1B2P68402 229 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 MRPS10P82664 201 aaKnown RBP12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 Q56UQ5 140 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 PHLDA1Q8WV24 401 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 ABHD1Q96SE0 405 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 CHRDL1Q9BU40 450 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 TMEM14BQ9NUH8 114 aa12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 RABL2AQ9UBK7 228 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC3-207ENST00000497251 KLK11Q9UBX7 282 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms