RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TGOLN2O43493 480 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 IGLV2-23P01705 113 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 IGHV2-70P01814 119 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 LYNX1P0DP58 116 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 NPPCP23582 126 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 MC5RP33032 325 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 GNB1P62873 340 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 ERHP84090 104 aaKnown RBP10.57□□□□□ -0.72
GARNL3-220ENST00000496711 VMA21Q3ZAQ7 101 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 FAM122AQ96E09 287 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 SLC35E1Q96K37 410 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 C12orf57Q99622 126 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 SEPSECSQ9HD40 501 aaKnown RBP10.57□□□□□ -0.72
GARNL3-220ENST00000496711 SLC45A2Q9UMX9 530 aa10.57□□□□□ -0.72
GARNL3-220ENST00000496711 MT-CO2P00403 227 aa10.56□□□□□ -0.72
GARNL3-220ENST00000496711 S100A8P05109 93 aa10.56□□□□□ -0.72
GARNL3-220ENST00000496711 LINC00869P0C866 280 aa10.56□□□□□ -0.72
GARNL3-220ENST00000496711 COL8A2P25067 703 aa10.56□□□□□ -0.72
GARNL3-220ENST00000496711 GCHFRP30047 84 aa10.56□□□□□ -0.72
GARNL3-220ENST00000496711 CD69Q07108 199 aa10.56□□□□□ -0.72
GARNL3-220ENST00000496711 GAMTQ14353 236 aa10.56□□□□□ -0.72
GARNL3-220ENST00000496711 SPATA31B1PQ5VZV4 182 aa10.56□□□□□ -0.72
GARNL3-220ENST00000496711 MOB3BQ86TA1 216 aa10.56□□□□□ -0.72
GARNL3-220ENST00000496711 OR51G1Q8NGK1 321 aa10.56□□□□□ -0.72
GARNL3-220ENST00000496711 IGHV2-26A0A0B4J1V2 119 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 H7BYZ3 331 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 MEOX2P50222 304 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 CDSNQ15517 529 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 HLA-DRB5Q30154 266 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 ZNF841Q6ZN19 808 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 SLC16A13Q7RTY0 426 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 ANAPC16Q96DE5 110 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 TMEM204Q9BSN7 226 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 ZNF430Q9H8G1 570 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-220ENST00000496711 DOK5Q9P104 306 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 SPTA1P02549 2419 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 IGKV1OR2-108A0A075B7D4 117 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 CACNG8Q8WXS5 425 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 OR5B12Q96R08 314 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 FUT9Q9Y231 359 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 ADGRG4Q8IZF6 3080 aa10.55□□□□□ -0.72
GARNL3-220ENST00000496711 CGB1A6NKQ9 187 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 E7EUB6 86 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 SLC25A17O43808 307 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 CLN5O75503 358 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 NDUFB4O95168 129 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 RBP4P02753 201 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 TRGC2P03986 189 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 S100PP25815 95 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 OR10J1P30954 320 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 GPX4P36969 197 aaPredicted RBP10.54□□□□□ -0.72
GARNL3-220ENST00000496711 GALR1P47211 349 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 LGALS7P47929 136 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 PRRX1P54821 245 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 C10orf55Q5SWW7 151 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 FAM78BQ5VT40 261 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 OR4P4Q8NGL7 312 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 TCEAL7Q9BRU2 100 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 CLEC7AQ9BXN2 247 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 YTHDF2Q9Y5A9 579 aaKnown RBP10.54□□□□□ -0.72
GARNL3-220ENST00000496711 NAV3Q8IVL0 2385 aa10.54□□□□□ -0.72
GARNL3-220ENST00000496711 IGLV1-47P01700 117 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 PFN1P07737 140 aaKnown RBP10.53□□□□□ -0.72
GARNL3-220ENST00000496711 SMIM6P0DI80 62 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 WT1-ASQ06250 92 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 MIR17HGQ75NE6 70 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 LINC01551Q86U37 167 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 OR8B3Q8NGG8 313 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 RNASEH2CQ8TDP1 164 aaKnown RBP10.53□□□□□ -0.72
GARNL3-220ENST00000496711 OR8B2Q96RD0 313 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 DERL1Q9BUN8 251 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 TPSG1Q9NRR2 321 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 ARL2-SNX15V9GYD0 113 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 MALRD1Q5VYJ5 2156 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 PPIAL4CA0A0B4J2A2 164 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 SCO2A0A1W2PP80 73 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 ENSAO43768 121 aaKnown RBP10.53□□□□□ -0.72
GARNL3-220ENST00000496711 HIST1H2BKO60814 126 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 ACTL6BO94805 426 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 HIST1H2BJP06899 126 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 PPIAL4GP0DN37 164 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 HIST1H2BOP23527 126 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 HIST1H2BBP33778 126 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 SUB1P53999 127 aaKnown RBP eCLIP10.53□□□□□ -0.72
GARNL3-220ENST00000496711 HIST1H2BDP58876 126 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 HIST1H2BCP62807 126 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 HIST2H2BEQ16778 126 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.53□□□□□ -0.72
GARNL3-220ENST00000496711 PNKDQ8N490 385 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 NECAP1Q8NC96 275 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 BEND2Q8NDZ0 799 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 C8orf46Q8TAG6 207 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 HIST1H2BHQ93079 126 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 HIST1H2BNQ99877 126 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 HIST1H2BMQ99879 126 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 PYGO2Q9BRQ0 406 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 C19orf24Q9BVV8 132 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 RAB1BQ9H0U4 201 aa10.53□□□□□ -0.72
GARNL3-220ENST00000496711 IGHV3-72A0A0B4J1Y9 119 aa10.52□□□□□ -0.73
GARNL3-220ENST00000496711 FOXH1O75593 365 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms