RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 POLR1DQ9Y2S0 133 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 LSM5Q9Y4Y9 91 aaKnown RBP3.12□□□□□ -1.91
SF3B1-212ENST00000496458 F11RQ9Y624 299 aaKnown RBP3.12□□□□□ -1.91
SF3B1-212ENST00000496458 SPTBN5Q9NRC6 3674 aaKnown RBP3.12□□□□□ -1.91
SF3B1-212ENST00000496458 XIRP2A4UGR9 3374 aa3.12□□□□□ -1.91
SF3B1-212ENST00000496458 PTPRZ1P23471 2315 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-212ENST00000496458 NLRC5Q86WI3 1866 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 A0A096LPI6 279 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 TRAV8-2A0A0B4J237 113 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 IGHV1-69DA0A0B4J2H0 117 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 A0A0G2JN53 185 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 FAM183AA6NL82 134 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF878C9JN71 531 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF670-ZNF695F2Z2N8 137 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 F6UZH7 168 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 G3V3Q6 166 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 UPK2O00526 184 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 PEX7O00628 323 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 PDCD6O75340 191 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 PMP2P02689 132 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 C1QAP02745 245 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 UCHL1P09936 223 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 TDGF1P13385 188 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 AKR1C4P17516 323 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 IL1RNP18510 177 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 CXCL2P19875 107 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 MIPP30301 263 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 BRS3P32247 399 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 MARCKSL1P49006 195 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 INPP1P49441 399 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 PSMB2P49721 201 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 NCBP2P52298 156 aaKnown RBP eCLIP3.11□□□□□ -1.91
SF3B1-212ENST00000496458 CRYBA4P53673 196 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 TAS2R46P59540 309 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 HBA1P69905 142 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 REG3AQ06141 175 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 C1orf194Q5T5A4 169 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 TBPL2Q6SJ96 375 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 ALKAL2Q6UX46 152 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 HIST2H3AQ71DI3 136 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF695Q8IW36 515 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 HIST3H2BBQ8N257 126 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF664Q8N3J9 261 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 OR4E2Q8NGC2 313 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 OR2T35Q8NGX2 323 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF675Q8TD23 568 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 Q8WTZ3 238 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 ARL11Q969Q4 196 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 CPNE2Q96FN4 548 aaPredicted RBP3.11□□□□□ -1.91
SF3B1-212ENST00000496458 DIRAS2Q96HU8 199 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 GABARAPL1Q9H0R8 117 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 UBQLN4Q9NRR5 601 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 DMAC2Q9NW81 257 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 VPREB3Q9UKI3 123 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 SDK1Q7Z5N4 2213 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 PIEZO1Q92508 2521 aa3.11□□□□□ -1.91
SF3B1-212ENST00000496458 MUC6Q6W4X9 2439 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 TRAV30A0A087WSZ9 112 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 TRAV19A0A0A6YYK7 116 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 IGKV1-8A0A0C4DH67 115 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 A0A0D9SG52 128 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 SNRPGP15A8MWD9 76 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 OR11H12B2RN74 326 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 C8orf87E5RJ46 101 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 CCL25O15444 150 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 PDYNP01213 254 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 C1QCP02747 245 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 OR10J4P0C629 311 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 ADCYAP1P18509 176 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 AGTR1P30556 359 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 CDKN2BP42772 138 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 NMUP48645 174 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 SYNJ2BPP57105 145 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 TPI1P60174 286 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 UBE2NP61088 152 aaKnown RBP3.1□□□□□ -1.91
SF3B1-212ENST00000496458 RHEBQ15382 184 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 LY6EQ16553 131 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 FBXL19-AS1Q494R0 122 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 MORN2Q502X0 79 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 TRMT12Q53H54 448 aaKnown RBP3.1□□□□□ -1.91
SF3B1-212ENST00000496458 LINC00483Q53H64 154 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 OCIAD2Q56VL3 154 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 BCL2L15Q5TBC7 163 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 OR10K2Q6IF99 312 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 SFXN4Q6P4A7 337 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 CLEC19AQ6UXS0 136 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 DGAT2L6Q6ZPD8 337 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 CAMK2N1Q7Z7J9 78 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 TMEM86BQ8N661 226 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 ZNF676Q8N7Q3 588 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 OR11H1Q8NG94 326 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 OR10G2Q8NGC3 310 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 OR1L8Q8NGR8 309 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 OR1J4Q8NGS1 313 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 OR11H2Q8NH07 326 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 OR5W2Q8NH69 310 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 OR10G6Q8NH81 332 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 SLC25A46Q96AG3 418 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 TMEM159Q96B96 161 aa3.1□□□□□ -1.91
SF3B1-212ENST00000496458 TEX37Q96LM6 180 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms