RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	RBMY1F	Q15415	496 aa	Known RBP	5.69	□□□□□ -1.5
NVL-223	ENST00000496393	SPHAR	Q15513	63 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393		Q56UQ5	140 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393	SLC25A24	Q6NUK1	477 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393	ZNF773	Q6PK81	442 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393	CLVS1	Q8IUQ0	354 aa	Predicted RBP	5.69	□□□□□ -1.5
NVL-223	ENST00000496393	MFSD4A	Q8N468	514 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393	GIMAP1	Q8WWP7	306 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393	BSCL2	Q96G97	398 aa	Predicted RBP	5.69	□□□□□ -1.5
NVL-223	ENST00000496393	HSD17B10	Q99714	261 aa	Known RBP	5.69	□□□□□ -1.5
NVL-223	ENST00000496393	RHPN1-AS1	Q9BWJ2	59 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393	HINT2	Q9BX68	163 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393	COMMD5	Q9GZQ3	224 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393	FKBP14	Q9NWM8	211 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393	C21orf62	Q9NYP8	219 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393	THYN1	Q9P016	225 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393	SMPX	Q9UHP9	88 aa		5.69	□□□□□ -1.5
NVL-223	ENST00000496393	LSM2	Q9Y333	95 aa	Known RBP	5.69	□□□□□ -1.5
NVL-223	ENST00000496393	IGHV3-66	A0A0C4DH42	116 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	IGHV7-4-1	A0A0J9YVY3	117 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	SMIM30	A4D0T7	59 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	PTGES3L	E9PB15	166 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	SULT1C2	O00338	296 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	CHEK1	O14757	476 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	ARL6IP5	O75915	188 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	DEFB131A	P59861	70 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	FABP5	Q01469	135 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	WT1-AS	Q06250	92 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	MLANA	Q16655	118 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	LCE5A	Q5TCM9	118 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	PVRIG	Q6DKI7	326 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393		Q6ZS49	121 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	NR2C2AP	Q86WQ0	139 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	SPAG16	Q8N0X2	631 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	FAM24B	Q8N5W8	94 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	GDPD1	Q8N9F7	314 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	TMEM116	Q8NCL8	245 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	VN1R17P	Q8TDU5	208 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	SCARB1	Q8WTV0	552 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	RAB2B	Q8WUD1	216 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	NUDCD2	Q8WVJ2	157 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	SECTM1	Q8WVN6	248 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	BORCS5	Q969J3	196 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	ZNF414	Q96IQ9	312 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	QTRT1	Q9BXR0	403 aa	Known RBP	5.68	□□□□□ -1.5
NVL-223	ENST00000496393	CCL28	Q9NRJ3	127 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	PLCXD1	Q9NUJ7	323 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	BET1L	Q9NYM9	111 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	CELA1	Q9UNI1	258 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	ETV7	Q9Y603	341 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393		V9GY05	133 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	LRP1B	Q9NZR2	4599 aa		5.68	□□□□□ -1.5
NVL-223	ENST00000496393	C15orf62	A8K5M9	175 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393		K7EMT4	169 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	UPK2	O00526	184 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	NUPL2	O15504	423 aa	Known RBP	5.67	□□□□□ -1.5
NVL-223	ENST00000496393	EIF4EBP3	O60516	100 aa	Predicted RBP	5.67	□□□□□ -1.5
NVL-223	ENST00000496393	PTHLH	P12272	177 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	C4BPB	P20851	252 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	DTYMK	P23919	212 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	IRF3	Q14653	427 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	SPSB3	Q6PJ21	355 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	ZNF66	Q6ZN08	573 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	TCF24	Q7RTU0	167 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	POM121L12	Q8N7R1	296 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	DMBX1	Q8NFW5	382 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	CMTM3	Q96MX0	182 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	ATG5	Q9H1Y0	275 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	HRH4	Q9H3N8	390 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	TMEM140	Q9NV12	185 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	CLEC5A	Q9NY25	188 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	SCN3B	Q9NY72	215 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	TPRKB	Q9Y3C4	175 aa		5.67	□□□□□ -1.5
NVL-223	ENST00000496393	DEFB131B	A0A096LNP1	70 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	TMEM235	A6NFC5	223 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	C15orf61	A6NNL5	157 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393		K7EIM0	57 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	CYB5B	O43169	146 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	PFDN1	O60925	122 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	SLC22A5	O76082	557 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	IGHV3-48	P01763	117 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	APOH	P02749	345 aa	Predicted RBP	5.66	□□□□□ -1.5
NVL-223	ENST00000496393	AMBP	P02760	352 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	FCER2	P06734	321 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	SERPINE2	P07093	398 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	GIG44	P09565	113 aa	Predicted RBP	5.66	□□□□□ -1.5
NVL-223	ENST00000496393	TRAPPC2	P0DI81	140 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	TRAPPC2B	P0DI82	140 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393		P0DMU3	169 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	FAM231A	P0DMU4	169 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	FAM231C	P0DMU5	169 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	CMC4	P56277	68 aa	Predicted RBP	5.66	□□□□□ -1.5
NVL-223	ENST00000496393	RPL11	P62913	178 aa	Known RBP	5.66	□□□□□ -1.5
NVL-223	ENST00000496393	CDNF	Q49AH0	187 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	GPR107	Q5VW38	600 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	UBE2DNL	Q8IWF7	75 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	STH	Q8IWL8	128 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	CENPS	Q8N2Z9	138 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	MAPKAPK5-AS1	Q8N8E1	139 aa		5.66	□□□□□ -1.5
NVL-223	ENST00000496393	OR13F1	Q8NGS4	319 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms