RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 OR5T1Q8NG75 326 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 OR9G1Q8NH87 305 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 NABP2Q9BQ15 211 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 PCGF1Q9BSM1 259 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 C19orf24Q9BVV8 132 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 NIT2Q9NQR4 276 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 NDUFA4L2Q9NRX3 87 aa9.01□□□□□ -0.97
CMSS1-208ENST00000496116 GAR1Q9NY12 217 aaKnown RBP9.01□□□□□ -0.97
CMSS1-208ENST00000496116 A0A087X0M5 115 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9□□□□□ -0.97
CMSS1-208ENST00000496116 A0A1B0GX30 115 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 INS-IGF2F8WCM5 200 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 RNASE2P10153 161 aaKnown RBP9□□□□□ -0.97
CMSS1-208ENST00000496116 FAM3BP58499 235 aaPredicted RBP9□□□□□ -0.97
CMSS1-208ENST00000496116 TMEM155Q4W5P6 130 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 TGIF2LXQ8IUE1 241 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 OR4P4Q8NGL7 312 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 TMEM167AQ8TBQ9 72 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 CACNG8Q8WXS5 425 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 BTF3L4Q96K17 158 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 UHRF2Q96PU4 802 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 SLC45A2Q9UMX9 530 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 WASHC3Q9Y3C0 194 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 MSRB2Q9Y3D2 182 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 ARL2-SNX15V9GYD0 113 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 ATMQ13315 3056 aa9□□□□□ -0.97
CMSS1-208ENST00000496116 TRBV23-1A0A0A0MS06 115 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 A0A1W2PPQ1 181 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 MC5RP33032 325 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 ZNF137PP52743 207 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 CD69Q07108 199 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 GAMTQ14353 236 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 C4orf17Q53FE4 359 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 OR2T10Q8NGZ9 312 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 FUT9Q9Y231 359 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 TNCP24821 2201 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 ROS1P08922 2347 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 PHOX2AO14813 284 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 LINC00869P0C866 280 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 IGHV1-8P0DP01 117 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 GPX4P36969 197 aaPredicted RBP8.99□□□□□ -0.97
CMSS1-208ENST00000496116 SUB1P53999 127 aaKnown RBP eCLIP8.99□□□□□ -0.97
CMSS1-208ENST00000496116 UCNP55089 124 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 DLX6P56179 175 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 HLA-DRB5Q30154 266 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 VMA21Q3ZAQ7 101 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 SPATA31B1PQ5VZV4 182 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 OR10W1Q8NGF6 305 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 ST6GALNAC6Q969X2 333 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 IMMP2LQ96T52 175 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 DERL1Q9BUN8 251 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 CHODLQ9H9P2 273 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 TMEM167BQ9NRX6 74 aa8.99□□□□□ -0.97
CMSS1-208ENST00000496116 MDFIC2A0A1B0GVS7 189 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 SCO2A0A1W2PP80 73 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 GGCTO75223 188 aaKnown RBP8.98□□□□□ -0.97
CMSS1-208ENST00000496116 ACTL6BO94805 426 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 TAS2R45P59539 299 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 LCN2P80188 198 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 PNKDQ8N490 385 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 TNFRSF14Q92956 283 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 SPOCK3Q9BQ16 436 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 ELOVL1Q9BW60 279 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 OR51M1Q9H341 326 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 TECRQ9NZ01 308 aaKnown RBP8.98□□□□□ -0.97
CMSS1-208ENST00000496116 PITPNC1Q9UKF7 332 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 YTHDF2Q9Y5A9 579 aaKnown RBP8.98□□□□□ -0.97
CMSS1-208ENST00000496116 PIEZO2Q9H5I5 2752 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 SPTBN2O15020 2390 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 FOXH1O75593 365 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 FABP1P07148 127 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 AREGP15514 252 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 OR10J1P30954 320 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 CA7P43166 264 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 PQLC2Q6ZP29 291 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 OR4X1Q8NH49 305 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 RNASEH2CQ8TDP1 164 aaKnown RBP8.98□□□□□ -0.97
CMSS1-208ENST00000496116 FAM122AQ96E09 287 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 SFRP2Q96HF1 295 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 TMEM133Q9H2Q1 129 aa8.98□□□□□ -0.97
CMSS1-208ENST00000496116 RALYQ9UKM9 306 aaKnown RBP8.98□□□□□ -0.97
CMSS1-208ENST00000496116 ARFGEF3Q5TH69 2177 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 IGKV1OR2-108A0A075B7D4 117 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 IFITM10A6NMD0 228 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 LGALS7P47929 136 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 CTAG1AP78358 180 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 DIAPH2-AS1Q14236 149 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 PSG5Q15238 335 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 FBXL19-AS1Q494R0 122 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 MIR17HGQ75NE6 70 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 MOB3BQ86TA1 216 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 MRPL41Q8IXM3 137 aaKnown RBP8.97□□□□□ -0.97
CMSS1-208ENST00000496116 HIST3H2BBQ8N257 126 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 MUC15Q8N387 334 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 LINC01560Q8TB33 94 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 GSN-AS1Q9NRJ2 163 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 PKDREJQ9NTG1 2253 aa8.97□□□□□ -0.97
CMSS1-208ENST00000496116 POLEQ07864 2286 aa8.96□□□□□ -0.97
CMSS1-208ENST00000496116 FAM90A27PA6NNH2 459 aa8.96□□□□□ -0.97
CMSS1-208ENST00000496116 IGLV2-23P01705 113 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms