RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ATG12O94817 140 aa18.25■□□□□ 0.51
HLA-C-209ENST00000495835 IGKV1-39P01597 117 aa18.25■□□□□ 0.51
HLA-C-209ENST00000495835 IGKV1D-39P04432 117 aa18.25■□□□□ 0.51
HLA-C-209ENST00000495835 MIXL1Q9H2W2 232 aa18.25■□□□□ 0.51
HLA-C-209ENST00000495835 C21orf62Q9NYP8 219 aa18.25■□□□□ 0.51
HLA-C-209ENST00000495835 RGS5O15539 181 aa18.24■□□□□ 0.51
HLA-C-209ENST00000495835 B3GALNT1O75752 331 aa18.24■□□□□ 0.51
HLA-C-209ENST00000495835 PGAM2P15259 253 aa18.24■□□□□ 0.51
HLA-C-209ENST00000495835 MFAP2P55001 183 aa18.24■□□□□ 0.51
HLA-C-209ENST00000495835 TMBIM6P55061 237 aa18.24■□□□□ 0.51
HLA-C-209ENST00000495835 HSPE1P61604 102 aaKnown RBP18.24■□□□□ 0.51
HLA-C-209ENST00000495835 GUCA2BQ16661 112 aa18.24■□□□□ 0.51
HLA-C-209ENST00000495835 ANKRD55Q3KP44 614 aa18.24■□□□□ 0.51
HLA-C-209ENST00000495835 SLC16A13Q7RTY0 426 aa18.24■□□□□ 0.51
HLA-C-209ENST00000495835 SCARB1Q8WTV0 552 aa18.24■□□□□ 0.51
HLA-C-209ENST00000495835 DBX1A6NMT0 343 aa18.23■□□□□ 0.51
HLA-C-209ENST00000495835 EDN2P20800 178 aa18.23■□□□□ 0.51
HLA-C-209ENST00000495835 PIGPP57054 158 aa18.23■□□□□ 0.51
HLA-C-209ENST00000495835 PRCDQ00LT1 54 aa18.23■□□□□ 0.51
HLA-C-209ENST00000495835 TM4SF20Q53R12 229 aa18.23■□□□□ 0.51
HLA-C-209ENST00000495835 RNASE12Q5GAN4 147 aaKnown RBP18.23■□□□□ 0.51
HLA-C-209ENST00000495835 UNQ9165/PRO28630Q6UXU0 137 aa18.23■□□□□ 0.51
HLA-C-209ENST00000495835 ZNF114Q8NC26 417 aa18.23■□□□□ 0.51
HLA-C-209ENST00000495835 MLXQ9UH92 298 aa18.23■□□□□ 0.51
HLA-C-209ENST00000495835 NDUFA4O00483 81 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 RAB3DO95716 219 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 CD7P09564 240 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 FCGR2BP31994 310 aaPredicted RBP18.22■□□□□ 0.51
HLA-C-209ENST00000495835 SPCS2Q15005 226 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 STEAP1BQ6NZ63 245 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 TMEM61Q8N0U2 210 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 OR2C3Q8N628 320 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 CCDC71LQ8N9Z2 235 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 CACNG8Q8WXS5 425 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 TMEM190Q8WZ59 177 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 MRGPRFQ96AM1 343 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 WDR89Q96FK6 387 aaPredicted RBP18.22■□□□□ 0.51
HLA-C-209ENST00000495835 TXN2Q99757 166 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 CEPT1Q9Y6K0 416 aa18.22■□□□□ 0.51
HLA-C-209ENST00000495835 C3orf85A0A1B0GTC6 90 aa18.21■□□□□ 0.51
HLA-C-209ENST00000495835 OR2T8A6NH00 312 aa18.21■□□□□ 0.51
HLA-C-209ENST00000495835 OR11H12B2RN74 326 aa18.21■□□□□ 0.51
HLA-C-209ENST00000495835 K7EIM0 57 aa18.21■□□□□ 0.51
HLA-C-209ENST00000495835 CTDSP2O14595 271 aa18.21■□□□□ 0.51
HLA-C-209ENST00000495835 CTDSPLO15194 276 aa18.21■□□□□ 0.51
HLA-C-209ENST00000495835 ERHP84090 104 aaKnown RBP18.21■□□□□ 0.51
HLA-C-209ENST00000495835 MEF2DQ14814 521 aa18.21■□□□□ 0.51
HLA-C-209ENST00000495835 CLVS1Q8IUQ0 354 aaPredicted RBP18.21■□□□□ 0.51
HLA-C-209ENST00000495835 PLEKHA3Q9HB20 300 aa18.21■□□□□ 0.51
HLA-C-209ENST00000495835 DAZ1Q9NQZ3 744 aaKnown RBP18.21■□□□□ 0.51
HLA-C-209ENST00000495835 CCDC59Q9P031 241 aaKnown RBP18.21■□□□□ 0.51
HLA-C-209ENST00000495835 COPZ2Q9P299 210 aa18.21■□□□□ 0.51
HLA-C-209ENST00000495835 RYR3Q15413 4870 aa18.2■□□□□ 0.5
HLA-C-209ENST00000495835 INS-IGF2F8WCM5 200 aa18.2■□□□□ 0.5
HLA-C-209ENST00000495835 K7EMT4 169 aa18.2■□□□□ 0.5
HLA-C-209ENST00000495835 SMIM4Q8WVI0 70 aa18.2■□□□□ 0.5
HLA-C-209ENST00000495835 C5orf66Q9H5L9 145 aa18.2■□□□□ 0.5
HLA-C-209ENST00000495835 CASC10Q5T4H9 136 aa18.19■□□□□ 0.5
HLA-C-209ENST00000495835 BTNL8Q6UX41 500 aa18.19■□□□□ 0.5
HLA-C-209ENST00000495835 RBPMS2Q6ZRY4 209 aaKnown RBP18.19■□□□□ 0.5
HLA-C-209ENST00000495835 DEFB125Q8N687 156 aa18.19■□□□□ 0.5
HLA-C-209ENST00000495835 OR4D10Q8NGI6 311 aa18.19■□□□□ 0.5
HLA-C-209ENST00000495835 DYNC2LI1Q8TCX1 351 aa18.19■□□□□ 0.5
HLA-C-209ENST00000495835 TP53RKQ96S44 253 aa18.19■□□□□ 0.5
HLA-C-209ENST00000495835 EDA2RQ9HAV5 297 aa18.19■□□□□ 0.5
HLA-C-209ENST00000495835 F8W735 103 aaPredicted RBP18.18■□□□□ 0.5
HLA-C-209ENST00000495835 CTSDP07339 412 aaPredicted RBP18.18■□□□□ 0.5
HLA-C-209ENST00000495835 P0C879 139 aa18.18■□□□□ 0.5
HLA-C-209ENST00000495835 LYL1P12980 280 aa18.18■□□□□ 0.5
HLA-C-209ENST00000495835 PI3P19957 117 aa18.18■□□□□ 0.5
HLA-C-209ENST00000495835 SURF2Q15527 256 aaPredicted RBP18.18■□□□□ 0.5
HLA-C-209ENST00000495835 OR52B4Q8NGK2 314 aa18.18■□□□□ 0.5
HLA-C-209ENST00000495835 ISOC1Q96CN7 298 aa18.18■□□□□ 0.5
HLA-C-209ENST00000495835 IGHV3-35A0A0C4DH35 117 aa18.17■□□□□ 0.5
HLA-C-209ENST00000495835 I3L2K1 104 aa18.17■□□□□ 0.5
HLA-C-209ENST00000495835 CTSGP08311 255 aa18.17■□□□□ 0.5
HLA-C-209ENST00000495835 UCP1P25874 307 aa18.17■□□□□ 0.5
HLA-C-209ENST00000495835 RPL5P46777 297 aaKnown RBP18.17■□□□□ 0.5
HLA-C-209ENST00000495835 MFAP4P55083 255 aa18.17■□□□□ 0.5
HLA-C-209ENST00000495835 RELQ04864 619 aaPredicted RBP18.17■□□□□ 0.5
HLA-C-209ENST00000495835 SCGB2B2Q4G0G5 96 aa18.17■□□□□ 0.5
HLA-C-209ENST00000495835 Q56UQ5 140 aa18.17■□□□□ 0.5
HLA-C-209ENST00000495835 LAMTOR1Q6IAA8 161 aa18.17■□□□□ 0.5
HLA-C-209ENST00000495835 OR13C8Q8NGS7 320 aa18.17■□□□□ 0.5
HLA-C-209ENST00000495835 DIRAS2Q96HU8 199 aa18.17■□□□□ 0.5
HLA-C-209ENST00000495835 CHRDL1Q9BU40 450 aa18.17■□□□□ 0.5
HLA-C-209ENST00000495835 SRD5A3Q9H8P0 318 aa18.17■□□□□ 0.5
HLA-C-209ENST00000495835 C15orf62A8K5M9 175 aa18.16■□□□□ 0.5
HLA-C-209ENST00000495835 DISC1C4P0D8 188 aa18.16■□□□□ 0.5
HLA-C-209ENST00000495835 IGKV1-5P01602 117 aa18.16■□□□□ 0.5
HLA-C-209ENST00000495835 ADMP35318 185 aa18.16■□□□□ 0.5
HLA-C-209ENST00000495835 AKR1C2P52895 323 aa18.16■□□□□ 0.5
HLA-C-209ENST00000495835 PPP5CP53041 499 aa18.16■□□□□ 0.5
HLA-C-209ENST00000495835 UBAC2Q8NBM4 344 aa18.16■□□□□ 0.5
HLA-C-209ENST00000495835 MARCH1Q8TCQ1 289 aa18.16■□□□□ 0.5
HLA-C-209ENST00000495835 SPAG8Q99932 426 aaPredicted RBP18.16■□□□□ 0.5
HLA-C-209ENST00000495835 HIPK2Q9H2X6 1198 aa18.16■□□□□ 0.5
HLA-C-209ENST00000495835 IGHV3-21A0A0B4J1V1 117 aa18.15■□□□□ 0.5
HLA-C-209ENST00000495835 A0A0B4J293 547 aa18.15■□□□□ 0.5
HLA-C-209ENST00000495835 RBMY1BA6NDE4 496 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms