RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 NAGKQ9UJ70 344 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 RELNP78509 3460 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 TRGV10A0A0A0MS01 117 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 SERF1AO75920 110 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 RAB31Q13636 194 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 Q6ZWC4 215 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 ZNF439Q8NDP4 499 aa10.64□□□□□ -0.71
PTPN7-217ENST00000495688 RNASE7Q9H1E1 156 aaKnown RBP10.64□□□□□ -0.71
PTPN7-217ENST00000495688 DYSFO75923 2080 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 CT45A6P0DMU7 189 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 CT45A5P0DMU8 189 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 CT45A7P0DMV0 189 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 GLRXP35754 106 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 FXYD3Q14802 87 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 CENPWQ5EE01 88 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 PQLC2Q6ZP29 291 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 MMD2Q8IY49 270 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 OR8I2Q8N0Y5 310 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 BEND2Q8NDZ0 799 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 OR1L6Q8NGR2 347 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 OR9G1Q8NH87 305 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 C11orf52Q96A22 123 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 SNHG12Q9BXW3 62 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 SLC45A2Q9UMX9 530 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 ZNF705FA8MVS1 300 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-217ENST00000495688 FCN1O00602 326 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 OR7C2O60412 319 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 ZNF705DP0CH99 300 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-217ENST00000495688 ZNF705BP0CI00 300 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-217ENST00000495688 LGALS4P56470 323 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 BTF3L4Q96K17 158 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 GAFA1Q96PS6 74 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 TBX15Q96SF7 602 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 PLEKHA3Q9HB20 300 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 V9GYV3 84 aa10.63□□□□□ -0.71
PTPN7-217ENST00000495688 MBD3L4A6NDZ8 208 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-217ENST00000495688 MBD3L3A6NE82 208 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-217ENST00000495688 MBD3L5A6NJ08 208 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-217ENST00000495688 CRISP2P16562 243 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 OR10J1P30954 320 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 SSTP61278 116 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 STUMQ69YW2 141 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 ZCCHC24Q8N2G6 241 aaKnown RBP10.62□□□□□ -0.71
PTPN7-217ENST00000495688 ST6GALNAC3Q8NDV1 305 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 MBD3L2Q8NHZ7 208 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-217ENST00000495688 UHRF2Q96PU4 802 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 RNF7Q9UBF6 113 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 FAM215AQ9Y5M1 114 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 LRBAP50851 2863 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 ABCA1O95477 2261 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 HELTA6NFD8 242 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 SNURFLB1AK76 121 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 GGTLC3B5MD39 225 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 FTH1P19P0C7X4 201 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 CDKN1AP38936 164 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 TCL1AP56279 114 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 SELENOTP62341 195 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 TIMM23BQ5SRD1 257 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 MORN5Q5VZ52 161 aa10.62□□□□□ -0.71
PTPN7-217ENST00000495688 IGLV3-9A0A075B6K5 115 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 TEX50A0A1B0GTY4 177 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 C9JCJ5 164 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 MT-CO2P00403 227 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 IGHV1-46P01743 117 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 GNG4P50150 75 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 TNFAIP6P98066 277 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-217ENST00000495688 FAM27E3Q08E93 113 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 C1orf194Q5T5A4 169 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 C1orf174Q8IYL3 243 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 FAM169BQ8N8A8 192 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 SLC35D1Q9NTN3 355 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 TPRP12270 2363 aaKnown RBP10.61□□□□□ -0.71
PTPN7-217ENST00000495688 E7EUB6 86 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 UPK2O00526 184 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 IGHV3-48P01763 117 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 AREGP15514 252 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 SUMO1P63165 101 aaKnown RBP10.61□□□□□ -0.71
PTPN7-217ENST00000495688 PRCDQ00LT1 54 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 KIAA1644Q3SXP7 199 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-217ENST00000495688 FAM222BQ8WU58 562 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 HSPB9Q9BQS6 159 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 TMEM106BQ9NUM4 274 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 RNF114Q9Y508 228 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 A8MXE2 369 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 ITGB1BP1O14713 200 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 SAA1P0DJI8 122 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-217ENST00000495688 REG1BP48304 166 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 CCL8P80075 99 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 RPEL1Q2QD12 228 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 TOMM20LQ6UXN7 152 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 NHLRC2Q8NBF2 726 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 PRNDQ9UKY0 176 aa10.61□□□□□ -0.71
PTPN7-217ENST00000495688 DCHS2Q6V1P9 2916 aa10.6□□□□□ -0.71
PTPN7-217ENST00000495688 ACACAQ13085 2346 aa10.6□□□□□ -0.71
PTPN7-217ENST00000495688 TRAV5A0A0B4J249 113 aa10.6□□□□□ -0.71
PTPN7-217ENST00000495688 POU2AF1Q16633 256 aa10.6□□□□□ -0.71
PTPN7-217ENST00000495688 LBHQ53QV2 105 aaPredicted RBP10.6□□□□□ -0.71
PTPN7-217ENST00000495688 BAGE3Q86Y29 109 aa10.6□□□□□ -0.71
PTPN7-217ENST00000495688 BAGE2Q86Y30 109 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms