RNA–Protein interactions for RNA: ENST00000495300.1

PBX2-204, Transcript of PBX homeobox 2, human

TSL 3

Gene PBX2, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PBX2-204	ENST00000495300	HINT2	Q9BX68	163 aa		10.54	□□□□□ -0.72
PBX2-204	ENST00000495300	PEF1	Q9UBV8	284 aa	Known RBP	10.54	□□□□□ -0.72
PBX2-204	ENST00000495300	FBXL7	Q9UJT9	491 aa		10.54	□□□□□ -0.72
PBX2-204	ENST00000495300	FLVCR2	Q9UPI3	526 aa		10.54	□□□□□ -0.72
PBX2-204	ENST00000495300	F11R	Q9Y624	299 aa	Known RBP	10.54	□□□□□ -0.72
PBX2-204	ENST00000495300	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	10.53	□□□□□ -0.72
PBX2-204	ENST00000495300		A0A0B4J2A0	478 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	ANKRD34B	A5PLL1	514 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	ANXA3	P12429	323 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	DEFA4	P12838	97 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	HOXD3	P31249	432 aa	Predicted RBP	10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	RAB25	P57735	213 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	UBE2M	P61081	183 aa	Known RBP	10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	SRPX	P78539	464 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	PPP1R1A	Q13522	171 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	EXOSC2	Q13868	293 aa	Known RBP	10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	ANKRD55	Q3KP44	614 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	PDLIM3	Q53GG5	364 aa	Predicted RBP	10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	NMS	Q5H8A3	153 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	LYZL2	Q7Z4W2	148 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	OR2C3	Q8N628	320 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	ZNF114	Q8NC26	417 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	OR52E5	Q8NH55	327 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	DCUN1D4	Q92564	292 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	CCDC140	Q96MF4	163 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	MCRIP2	Q9BUT9	160 aa	Known RBP	10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	WDR12	Q9GZL7	423 aa	Known RBP	10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	SHPK	Q9UHJ6	478 aa		10.53	□□□□□ -0.72
PBX2-204	ENST00000495300	SFT2D2	O95562	160 aa		10.52	□□□□□ -0.73
PBX2-204	ENST00000495300	EGFEM1P	Q0D2K5	195 aa		10.52	□□□□□ -0.73
PBX2-204	ENST00000495300	KLF5	Q13887	457 aa	Predicted RBP	10.52	□□□□□ -0.73
PBX2-204	ENST00000495300	ZNF846	Q147U1	533 aa		10.52	□□□□□ -0.73
PBX2-204	ENST00000495300	LGI3	Q8N145	548 aa		10.52	□□□□□ -0.73
PBX2-204	ENST00000495300	OR1P1	Q8NH06	330 aa		10.52	□□□□□ -0.73
PBX2-204	ENST00000495300	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	10.52	□□□□□ -0.73
PBX2-204	ENST00000495300	CACNG5	Q9UF02	275 aa		10.52	□□□□□ -0.73
PBX2-204	ENST00000495300	TBC1D24	Q9ULP9	559 aa		10.52	□□□□□ -0.73
PBX2-204	ENST00000495300	DUXB	A0A1W2PPF3	345 aa		10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	MFSD2B	A6NFX1	497 aa		10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	BMPR1B	O00238	502 aa		10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	ZP3	P21754	424 aa		10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	VAMP1	P23763	118 aa		10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	IFITM3	Q01628	133 aa		10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	FAM209B	Q5JX69	171 aa		10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	PVRIG	Q6DKI7	326 aa		10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	OR1L6	Q8NGR2	347 aa		10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	RNASE11	Q8TAA1	199 aa	Known RBP	10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	PLEKHA3	Q9HB20	300 aa		10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	THYN1	Q9P016	225 aa		10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	NOTCH3	Q9UM47	2321 aa		10.51	□□□□□ -0.73
PBX2-204	ENST00000495300	DNAH3	Q8TD57	4116 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	TRBV7-1	A0A0A6YYK4	115 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	PIGBOS1	A0A0B4J2F0	54 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	C9orf170	A2RU37	121 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	OVOL1	O14753	267 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	UPK1B	O75841	260 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	IFNA17	P01571	189 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	OR4E1	P0C645	316 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	MECP2	P51608	486 aa	Known RBP	10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	SPCS3	P61009	180 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	DEFA6	Q01524	100 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	ASAH1	Q13510	395 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	BSX	Q3C1V8	233 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	SPINK9	Q5DT21	86 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	ACSM6	Q6P461	480 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	ZNF502	Q8TBZ5	544 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	VN1R17P	Q8TDU5	208 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	EEF1AKMT3	Q96AZ1	226 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	CXorf58	Q96LI9	332 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300		S4R3C0	116 aa		10.5	□□□□□ -0.73
PBX2-204	ENST00000495300	SEC14L6	B5MCN3	397 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300		F8W735	103 aa	Predicted RBP	10.49	□□□□□ -0.73
PBX2-204	ENST00000495300		K7EIM0	57 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	CYB5B	O43169	146 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	PITX3	O75364	302 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	IGHV3-23	P01764	117 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	HLA-A	P01891	365 aa	Known RBP	10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	TCRB	P04435	133 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	SULT1A3	P0DMM9	295 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	SULT1A4	P0DMN0	295 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	ANXA7	P20073	488 aa	Known RBP	10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	KRTAP10-11	P60412	298 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	ERH	P84090	104 aa	Known RBP	10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	DHRS2	Q13268	280 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	SLC25A24	Q6NUK1	477 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	PDCD10	Q9BUL8	212 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	GPR61	Q9BZJ8	451 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300	C20orf85	Q9H1P6	137 aa		10.49	□□□□□ -0.73
PBX2-204	ENST00000495300		A0A1B0GU03	582 aa		10.48	□□□□□ -0.73
PBX2-204	ENST00000495300	PPP5D1	E7EU14	171 aa		10.48	□□□□□ -0.73
PBX2-204	ENST00000495300		I3L2K1	104 aa		10.48	□□□□□ -0.73
PBX2-204	ENST00000495300	RNASE2	P10153	161 aa	Known RBP	10.48	□□□□□ -0.73
PBX2-204	ENST00000495300	SLC25A6	P12236	298 aa		10.48	□□□□□ -0.73
PBX2-204	ENST00000495300	SMCO1	Q147U7	214 aa		10.48	□□□□□ -0.73
PBX2-204	ENST00000495300	C9orf66	Q5T8R8	295 aa		10.48	□□□□□ -0.73
PBX2-204	ENST00000495300	CLEC19A	Q6UXS0	136 aa		10.48	□□□□□ -0.73
PBX2-204	ENST00000495300	IL34	Q6ZMJ4	242 aa		10.48	□□□□□ -0.73
PBX2-204	ENST00000495300	SCARB1	Q8WTV0	552 aa		10.48	□□□□□ -0.73
PBX2-204	ENST00000495300	ATP6V0B	Q99437	205 aa		10.48	□□□□□ -0.73
PBX2-204	ENST00000495300	HSPB7	Q9UBY9	170 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms