RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 PRNDQ9UKY0 176 aa17.23■□□□□ 0.35
COL27A1-208ENST00000494780 NSG2Q9Y328 171 aa17.23■□□□□ 0.35
COL27A1-208ENST00000494780 K7EIM0 57 aa17.22■□□□□ 0.35
COL27A1-208ENST00000494780 PMP2P02689 132 aa17.22■□□□□ 0.35
COL27A1-208ENST00000494780 NAT1P18440 290 aa17.22■□□□□ 0.35
COL27A1-208ENST00000494780 G6PCP35575 357 aa17.22■□□□□ 0.35
COL27A1-208ENST00000494780 TSPAN14Q8NG11 270 aa17.22■□□□□ 0.35
COL27A1-208ENST00000494780 OR5H2Q8NGV7 314 aa17.22■□□□□ 0.35
COL27A1-208ENST00000494780 OR5B3Q8NH48 314 aa17.22■□□□□ 0.35
COL27A1-208ENST00000494780 RNF183Q96D59 192 aa17.22■□□□□ 0.35
COL27A1-208ENST00000494780 C15orf62A8K5M9 175 aa17.21■□□□□ 0.35
COL27A1-208ENST00000494780 GPR31O00270 319 aa17.21■□□□□ 0.35
COL27A1-208ENST00000494780 LY6G6CO95867 125 aa17.21■□□□□ 0.35
COL27A1-208ENST00000494780 EWSR1Q01844 656 aaKnown RBP eCLIP17.21■□□□□ 0.35
COL27A1-208ENST00000494780 Q56UQ5 140 aa17.21■□□□□ 0.35
COL27A1-208ENST00000494780 TMEM69Q5SWH9 247 aa17.21■□□□□ 0.35
COL27A1-208ENST00000494780 CEMP1Q6PRD7 247 aaPredicted RBP17.21■□□□□ 0.35
COL27A1-208ENST00000494780 UBAC2Q8NBM4 344 aa17.21■□□□□ 0.35
COL27A1-208ENST00000494780 TSC22D3Q99576 134 aa17.21■□□□□ 0.35
COL27A1-208ENST00000494780 FXYD6Q9H0Q3 95 aa17.21■□□□□ 0.35
COL27A1-208ENST00000494780 CTSDP07339 412 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-208ENST00000494780 TAS2R20P59543 309 aa17.2■□□□□ 0.34
COL27A1-208ENST00000494780 OR6F1Q8NGZ6 308 aa17.2■□□□□ 0.34
COL27A1-208ENST00000494780 OR1P1Q8NH06 330 aa17.2■□□□□ 0.34
COL27A1-208ENST00000494780 GALNT14Q96FL9 552 aa17.2■□□□□ 0.34
COL27A1-208ENST00000494780 IGHV3OR16-8A0A075B7F1 116 aa17.19■□□□□ 0.34
COL27A1-208ENST00000494780 CTSGP08311 255 aa17.19■□□□□ 0.34
COL27A1-208ENST00000494780 KCTD21Q4G0X4 260 aa17.19■□□□□ 0.34
COL27A1-208ENST00000494780 TMEM217Q8N7C4 229 aa17.19■□□□□ 0.34
COL27A1-208ENST00000494780 SAMD12Q8N8I0 201 aa17.19■□□□□ 0.34
COL27A1-208ENST00000494780 TMEM14BQ9NUH8 114 aa17.19■□□□□ 0.34
COL27A1-208ENST00000494780 SMPXQ9UHP9 88 aa17.19■□□□□ 0.34
COL27A1-208ENST00000494780 C15orf61A6NNL5 157 aa17.18■□□□□ 0.34
COL27A1-208ENST00000494780 ZNF207O43670 478 aaKnown RBP17.18■□□□□ 0.34
COL27A1-208ENST00000494780 RPL35AP18077 110 aaKnown RBP17.18■□□□□ 0.34
COL27A1-208ENST00000494780 PRSS3P35030 304 aa17.18■□□□□ 0.34
COL27A1-208ENST00000494780 RELQ04864 619 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-208ENST00000494780 MAP6D1Q9H9H5 199 aa17.18■□□□□ 0.34
COL27A1-208ENST00000494780 FAM212BQ9NTI7 297 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-208ENST00000494780 KLK5Q9Y337 293 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-208ENST00000494780 NUPL2O15504 423 aaKnown RBP17.17■□□□□ 0.34
COL27A1-208ENST00000494780 TGFBR1P36897 503 aa17.17■□□□□ 0.34
COL27A1-208ENST00000494780 RPS19P39019 145 aaKnown RBP17.17■□□□□ 0.34
COL27A1-208ENST00000494780 CMC4P56277 68 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-208ENST00000494780 C6orf62Q9GZU0 229 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-208ENST00000494780 IGHV7-4-1A0A0J9YVY3 117 aa17.16■□□□□ 0.34
COL27A1-208ENST00000494780 DBX1A6NMT0 343 aa17.16■□□□□ 0.34
COL27A1-208ENST00000494780 S100GP29377 79 aa17.16■□□□□ 0.34
COL27A1-208ENST00000494780 FCGR2BP31994 310 aaPredicted RBP17.16■□□□□ 0.34
COL27A1-208ENST00000494780 HRH1P35367 487 aa17.16■□□□□ 0.34
COL27A1-208ENST00000494780 LPCAT3Q6P1A2 487 aa17.16■□□□□ 0.34
COL27A1-208ENST00000494780 LYSMD2Q8IV50 215 aa17.16■□□□□ 0.34
COL27A1-208ENST00000494780 ZNF414Q96IQ9 312 aa17.16■□□□□ 0.34
COL27A1-208ENST00000494780 RNF2Q99496 336 aa17.16■□□□□ 0.34
COL27A1-208ENST00000494780 TXN2Q99757 166 aa17.16■□□□□ 0.34
COL27A1-208ENST00000494780 RHPN1-AS1Q9BWJ2 59 aa17.16■□□□□ 0.34
COL27A1-208ENST00000494780 CHEK1O14757 476 aa17.15■□□□□ 0.34
COL27A1-208ENST00000494780 HLA-DMAP28067 261 aa17.15■□□□□ 0.34
COL27A1-208ENST00000494780 MFAP4P55083 255 aa17.15■□□□□ 0.34
COL27A1-208ENST00000494780 PHLDA2Q53GA4 152 aa17.15■□□□□ 0.34
COL27A1-208ENST00000494780 TMEM116Q8NCL8 245 aa17.15■□□□□ 0.34
COL27A1-208ENST00000494780 SLC25A46Q96AG3 418 aa17.15■□□□□ 0.34
COL27A1-208ENST00000494780 OR10C1Q96KK4 312 aa17.15■□□□□ 0.34
COL27A1-208ENST00000494780 I3L2K1 104 aa17.14■□□□□ 0.33
COL27A1-208ENST00000494780 APRG1Q8IVJ8 170 aa17.14■□□□□ 0.33
COL27A1-208ENST00000494780 MISP3Q96FF7 219 aa17.14■□□□□ 0.33
COL27A1-208ENST00000494780 SEC22AQ96IW7 307 aa17.14■□□□□ 0.33
COL27A1-208ENST00000494780 YIF1AO95070 293 aa17.13■□□□□ 0.33
COL27A1-208ENST00000494780 TSPAN5P62079 268 aa17.13■□□□□ 0.33
COL27A1-208ENST00000494780 H2BFWTQ7Z2G1 175 aa17.13■□□□□ 0.33
COL27A1-208ENST00000494780 TBC1D26Q86UD7 250 aa17.13■□□□□ 0.33
COL27A1-208ENST00000494780 ZNF114Q8NC26 417 aa17.13■□□□□ 0.33
COL27A1-208ENST00000494780 OR4A16Q8NH70 328 aa17.13■□□□□ 0.33
COL27A1-208ENST00000494780 GPX8Q8TED1 209 aa17.13■□□□□ 0.33
COL27A1-208ENST00000494780 NXF2Q9GZY0 626 aaKnown RBP17.13■□□□□ 0.33
COL27A1-208ENST00000494780 MT-CO2P00403 227 aa17.12■□□□□ 0.33
COL27A1-208ENST00000494780 PRCDQ00LT1 54 aa17.12■□□□□ 0.33
COL27A1-208ENST00000494780 YIPF6Q96EC8 236 aa17.12■□□□□ 0.33
COL27A1-208ENST00000494780 CMTM3Q96MX0 182 aa17.12■□□□□ 0.33
COL27A1-208ENST00000494780 CSTL1Q9H114 145 aa17.12■□□□□ 0.33
COL27A1-208ENST00000494780 TRAV14DV4A0A0A6YYC5 116 aa17.11■□□□□ 0.33
COL27A1-208ENST00000494780 UCP3P55916 312 aa17.11■□□□□ 0.33
COL27A1-208ENST00000494780 LSM3P62310 102 aaKnown RBP17.11■□□□□ 0.33
COL27A1-208ENST00000494780 GATAD1Q8WUU5 269 aa17.11■□□□□ 0.33
COL27A1-208ENST00000494780 SCPEP1Q9HB40 452 aa17.11■□□□□ 0.33
COL27A1-208ENST00000494780 IGHV3-49A0A0A0MS15 119 aa17.1■□□□□ 0.33
COL27A1-208ENST00000494780 MPTX1A8MV57 137 aa17.1■□□□□ 0.33
COL27A1-208ENST00000494780 IGKV1-39P01597 117 aa17.1■□□□□ 0.33
COL27A1-208ENST00000494780 IGKV1D-39P04432 117 aa17.1■□□□□ 0.33
COL27A1-208ENST00000494780 EIF4EP06730 217 aaKnown RBP17.1■□□□□ 0.33
COL27A1-208ENST00000494780 TFPI2P48307 235 aa17.1■□□□□ 0.33
COL27A1-208ENST00000494780 HSPE1P61604 102 aaKnown RBP17.1■□□□□ 0.33
COL27A1-208ENST00000494780 FAM90A2PQ658T7 463 aa17.1■□□□□ 0.33
COL27A1-208ENST00000494780 PHLDA1Q8WV24 401 aaPredicted RBP17.1■□□□□ 0.33
COL27A1-208ENST00000494780 SMIM31A0A1B0GVY4 71 aa17.09■□□□□ 0.33
COL27A1-208ENST00000494780 GNG7O60262 68 aa17.09■□□□□ 0.33
COL27A1-208ENST00000494780 CD5P06127 495 aa17.09■□□□□ 0.33
COL27A1-208ENST00000494780 ERHP84090 104 aaKnown RBP17.09■□□□□ 0.33
COL27A1-208ENST00000494780 ZNF124Q15973 351 aa17.09■□□□□ 0.33
COL27A1-208ENST00000494780 MRGPRFQ96AM1 343 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms