RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 SLC25A24Q6NUK1 477 aa8.66□□□□□ -1.02
VTI1A-208ENST00000494728 TBC1D26Q86UD7 250 aa8.66□□□□□ -1.02
VTI1A-208ENST00000494728 UBAC2Q8NBM4 344 aa8.66□□□□□ -1.02
VTI1A-208ENST00000494728 OR1L6Q8NGR2 347 aa8.66□□□□□ -1.02
VTI1A-208ENST00000494728 OR6F1Q8NGZ6 308 aa8.66□□□□□ -1.02
VTI1A-208ENST00000494728 SEC22AQ96IW7 307 aa8.66□□□□□ -1.02
VTI1A-208ENST00000494728 OVOL2Q9BRP0 275 aa8.66□□□□□ -1.02
VTI1A-208ENST00000494728 GGTLC1Q9BX51 225 aa8.66□□□□□ -1.02
VTI1A-208ENST00000494728 C21orf62Q9NYP8 219 aa8.66□□□□□ -1.02
VTI1A-208ENST00000494728 IGHV3-48P01763 117 aa8.65□□□□□ -1.02
VTI1A-208ENST00000494728 ELLP55199 621 aaPredicted RBP8.65□□□□□ -1.02
VTI1A-208ENST00000494728 SPINK9Q5DT21 86 aa8.65□□□□□ -1.02
VTI1A-208ENST00000494728 CMTM1Q8IZ96 169 aa8.65□□□□□ -1.02
VTI1A-208ENST00000494728 CADM3Q8N126 398 aa8.65□□□□□ -1.02
VTI1A-208ENST00000494728 BORCS5Q969J3 196 aa8.65□□□□□ -1.02
VTI1A-208ENST00000494728 MARC2Q969Z3 335 aa8.65□□□□□ -1.02
VTI1A-208ENST00000494728 MRGPRFQ96AM1 343 aa8.65□□□□□ -1.02
VTI1A-208ENST00000494728 BSCL2Q96G97 398 aaPredicted RBP8.65□□□□□ -1.02
VTI1A-208ENST00000494728 DAZ1Q9NQZ3 744 aaKnown RBP8.65□□□□□ -1.02
VTI1A-208ENST00000494728 THYN1Q9P016 225 aa8.65□□□□□ -1.02
VTI1A-208ENST00000494728 MRPL27Q9P0M9 148 aaKnown RBP8.65□□□□□ -1.02
VTI1A-208ENST00000494728 UFC1Q9Y3C8 167 aa8.65□□□□□ -1.02
VTI1A-208ENST00000494728 DNAH6Q9C0G6 4158 aa8.65□□□□□ -1.03
VTI1A-208ENST00000494728 AGRNO00468 2067 aa8.65□□□□□ -1.03
VTI1A-208ENST00000494728 TRAV25A0A0B4J276 109 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 I3L2K1 104 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 CTSGP08311 255 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 PI3P19957 117 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 RCVRNP35243 200 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 ZNF124Q15973 351 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 CTF1Q16619 201 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 HSD17B13Q7Z5P4 300 aaPredicted RBP8.64□□□□□ -1.03
VTI1A-208ENST00000494728 OR5B3Q8NH48 314 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 C20orf24Q9BUV8 137 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 C5orf66Q9H5L9 145 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 SCPEP1Q9HB40 452 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 VCX3AQ9NNX9 186 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 PRNDQ9UKY0 176 aa8.64□□□□□ -1.03
VTI1A-208ENST00000494728 HECTD4Q9Y4D8 3996 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 LOC102724200A0A096LPH7 203 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-208ENST00000494728 IGHV3-49A0A0A0MS15 119 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 NDUFA4O00483 81 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 TSPAN4O14817 238 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 SNAPC5O75971 98 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 GABARAPO95166 117 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 IGKV1-5P01602 117 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 P0C879 139 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 TSPAN5P62079 268 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 DEFB135Q30KP9 77 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 Q56UQ5 140 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 RBPMS2Q6ZRY4 209 aaKnown RBP8.63□□□□□ -1.03
VTI1A-208ENST00000494728 LHFPL1Q86WI0 220 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 OR2C3Q8N628 320 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 OR4D10Q8NGI6 311 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 OR1P1Q8NH06 330 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 SPAG8Q99932 426 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-208ENST00000494728 KLK11Q9UBX7 282 aa8.63□□□□□ -1.03
VTI1A-208ENST00000494728 IGHV3OR16-13A0A075B7E8 117 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 IGHV3-74A0A0B4J1X5 117 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 A0A0G2JRQ6 117 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 PRCDQ00LT1 54 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 SPSB3Q6PJ21 355 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 SLC38A6Q8IZM9 456 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 ZNF114Q8NC26 417 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 OR52I2Q8NH67 350 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 MISP3Q96FF7 219 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 CMTM3Q96MX0 182 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 TP53RKQ96S44 253 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 ABHD1Q96SE0 405 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 RNF2Q99496 336 aa8.62□□□□□ -1.03
VTI1A-208ENST00000494728 FAM212BQ9NTI7 297 aaPredicted RBP8.62□□□□□ -1.03
VTI1A-208ENST00000494728 A0A0J9YWU9 116 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 CYB5BO43169 146 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 MT-CO2P00403 227 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 CD3DP04234 171 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 CTSDP07339 412 aaPredicted RBP8.61□□□□□ -1.03
VTI1A-208ENST00000494728 RPL35AP18077 110 aaKnown RBP8.61□□□□□ -1.03
VTI1A-208ENST00000494728 PPP5CP53041 499 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 UCP3P55916 312 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 ANKRD55Q3KP44 614 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 H2BFWTQ7Z2G1 175 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 OR10C1Q96KK4 312 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 TMEM56Q96MV1 263 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 ATP6V0BQ99437 205 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 TSC22D3Q99576 134 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 MIXL1Q9H2W2 232 aa8.61□□□□□ -1.03
VTI1A-208ENST00000494728 A0A0B4J293 547 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 IGHV7-4-1A0A0J9YVY3 117 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 SMIM31A0A1B0GVY4 71 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 C15orf62A8K5M9 175 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 K7EMT4 169 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 CHEK1O14757 476 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 FCGR2BP31994 310 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-208ENST00000494728 PIGPP57054 158 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 RND3P61587 244 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 PMS2P11Q13670 270 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 FAAP20Q6NZ36 180 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 APRG1Q8IVJ8 170 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 LILRB2Q8N423 598 aa8.6□□□□□ -1.03
VTI1A-208ENST00000494728 OR4A16Q8NH70 328 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms