RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 M0QYG6 137 aa7.21□□□□□ -1.26
MSH5-218ENST00000494646 EIF4EBP3O60516 100 aaPredicted RBP7.21□□□□□ -1.26
MSH5-218ENST00000494646 RBMY1DP0C7P1 496 aaKnown RBP7.21□□□□□ -1.26
MSH5-218ENST00000494646 PTBP1P26599 531 aaKnown RBP eCLIP7.21□□□□□ -1.261e-7■□□□□ 10.1
MSH5-218ENST00000494646 LINC00322Q6ZN03 302 aaPredicted RBP7.21□□□□□ -1.26
MSH5-218ENST00000494646 TBC1D26Q86UD7 250 aa7.21□□□□□ -1.26
MSH5-218ENST00000494646 TMEM61Q8N0U2 210 aa7.21□□□□□ -1.26
MSH5-218ENST00000494646 UBAC2Q8NBM4 344 aa7.21□□□□□ -1.26
MSH5-218ENST00000494646 CMTM3Q96MX0 182 aa7.21□□□□□ -1.26
MSH5-218ENST00000494646 IGHV3OR16-8A0A075B7F1 116 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 CYB5BO43169 146 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 TGOLN2O43493 480 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 ZNF207O43670 478 aaKnown RBP7.2□□□□□ -1.26
MSH5-218ENST00000494646 IGKV1-39P01597 117 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 IGKV1D-39P04432 117 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 GPR107Q5VW38 600 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 LPCAT3Q6P1A2 487 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 BTNL8Q6UX41 500 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 RBPMS2Q6ZRY4 209 aaKnown RBP7.2□□□□□ -1.26
MSH5-218ENST00000494646 LAX1Q8IWV1 398 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 GDPD1Q8N9F7 314 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 OR52B4Q8NGK2 314 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 OR4A16Q8NH70 328 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 SCARB1Q8WTV0 552 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 ISOC1Q96CN7 298 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 SRSF8Q9BRL6 282 aaKnown RBP7.2□□□□□ -1.26
MSH5-218ENST00000494646 CHRDL1Q9BU40 450 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 HIPK2Q9H2X6 1198 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 SCPEP1Q9HB40 452 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 MRPL27Q9P0M9 148 aaKnown RBP7.2□□□□□ -1.26
MSH5-218ENST00000494646 KLK11Q9UBX7 282 aa7.2□□□□□ -1.26
MSH5-218ENST00000494646 F11RQ9Y624 299 aaKnown RBP7.2□□□□□ -1.26
MSH5-218ENST00000494646 C8orf88P0DMB2 117 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 PI3P19957 117 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 S100GP29377 79 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 RCVRNP35243 200 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 Q56UQ5 140 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 LCE2DQ5TA82 110 aaPredicted RBP7.19□□□□□ -1.26
MSH5-218ENST00000494646 THOC7Q6I9Y2 204 aaKnown RBP7.19□□□□□ -1.26
MSH5-218ENST00000494646 SLC16A13Q7RTY0 426 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 H2BFWTQ7Z2G1 175 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 OR2C3Q8N628 320 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 CLRN3Q8NCR9 226 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 OR52I2Q8NH67 350 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 VN1R17PQ8TDU5 208 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 LSM10Q969L4 123 aaKnown RBP7.19□□□□□ -1.26
MSH5-218ENST00000494646 SEC22AQ96IW7 307 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 TMEM56Q96MV1 263 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 C20orf24Q9BUV8 137 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 ZNF436Q9C0F3 470 aaPredicted RBP7.19□□□□□ -1.26
MSH5-218ENST00000494646 FKBP11Q9NYL4 201 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 UFC1Q9Y3C8 167 aa7.19□□□□□ -1.26
MSH5-218ENST00000494646 C15orf61A6NNL5 157 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 A8MWP6 167 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 K7EIM0 57 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 IGHV3-48P01763 117 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 CD3DP04234 171 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 FGF2P09038 288 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 SMIM18P0DKX4 95 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 PGAM2P15259 253 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 ZNF182P17025 639 aaPredicted RBP7.18□□□□□ -1.26
MSH5-218ENST00000494646 UCP3P55916 312 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 CTF1Q16619 201 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 IZUMO4Q1ZYL8 232 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 SPINK9Q5DT21 86 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 HSD17B13Q7Z5P4 300 aaPredicted RBP7.18□□□□□ -1.26
MSH5-218ENST00000494646 SLC38A6Q8IZM9 456 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 MRGPRFQ96AM1 343 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 MISP3Q96FF7 219 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 TSC22D3Q99576 134 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 C21orf62Q9NYP8 219 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 EXTL2Q9UBQ6 330 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 UBQLN2Q9UHD9 624 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 PRNDQ9UKY0 176 aa7.18□□□□□ -1.26
MSH5-218ENST00000494646 DNAH10Q8IVF4 4471 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 F8W735 103 aaPredicted RBP7.17□□□□□ -1.26
MSH5-218ENST00000494646 CTSGP08311 255 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 ADMP35318 185 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 ELLP55199 621 aaPredicted RBP7.17□□□□□ -1.26
MSH5-218ENST00000494646 HSPE1P61604 102 aaKnown RBP7.17□□□□□ -1.26
MSH5-218ENST00000494646 ANKRD55Q3KP44 614 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 CADM3Q8N126 398 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 OR1L6Q8NGR2 347 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 OR5B3Q8NH48 314 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 TMEM190Q8WZ59 177 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 AP3S1Q92572 193 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 MARC2Q969Z3 335 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 PINX1Q96BK5 328 aaKnown RBP7.17□□□□□ -1.26
MSH5-218ENST00000494646 BSCL2Q96G97 398 aaPredicted RBP7.17□□□□□ -1.26
MSH5-218ENST00000494646 ABHD1Q96SE0 405 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 MIXL1Q9H2W2 232 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 TMEM14BQ9NUH8 114 aa7.17□□□□□ -1.26
MSH5-218ENST00000494646 LOC102724200A0A096LPH7 203 aaPredicted RBP7.16□□□□□ -1.26
MSH5-218ENST00000494646 IGHV3-49A0A0A0MS15 119 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 TRAV25A0A0B4J276 109 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 NDUFA4O00483 81 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 CTDSP2O14595 271 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 RGS5O15539 181 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 YIF1AO95070 293 aa7.16□□□□□ -1.26
MSH5-218ENST00000494646 GABARAPO95166 117 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms