RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 C1QBP02746 253 aa9.16□□□□□ -0.94
CSNK1E-212ENST00000494610 RPLP1P05386 114 aaKnown RBP9.16□□□□□ -0.94
CSNK1E-212ENST00000494610 NUP62P37198 522 aaPredicted RBP9.16□□□□□ -0.94
CSNK1E-212ENST00000494610 RPL8P62917 257 aaKnown RBP9.16□□□□□ -0.94
CSNK1E-212ENST00000494610 MUC7Q8TAX7 377 aa9.16□□□□□ -0.94
CSNK1E-212ENST00000494610 EAF1Q96JC9 268 aaPredicted RBP9.16□□□□□ -0.94
CSNK1E-212ENST00000494610 HYLS1Q96M11 299 aa9.16□□□□□ -0.94
CSNK1E-212ENST00000494610 COMMD5Q9GZQ3 224 aa9.16□□□□□ -0.94
CSNK1E-212ENST00000494610 ENY2Q9NPA8 101 aa9.16□□□□□ -0.94
CSNK1E-212ENST00000494610 TMEM14BQ9NUH8 114 aa9.16□□□□□ -0.94
CSNK1E-212ENST00000494610 METTL1Q9UBP6 276 aaKnown RBP9.16□□□□□ -0.94
CSNK1E-212ENST00000494610 MOB4Q9Y3A3 225 aa9.16□□□□□ -0.94
CSNK1E-212ENST00000494610 A0A0G2JRQ6 117 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 A0A1W2PN81 502 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 L7N2F9 121 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 CCL24O00175 119 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 FGF16O43320 207 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 SLC25A17O43808 307 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 PITX3O75364 302 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 IGLV2-23P01705 113 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 CHRNA7P36544 502 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 SPCS3P61009 180 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 VAMP2P63027 116 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 RPP30P78346 268 aaKnown RBP9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 TNFRSF9Q07011 255 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 PSG5Q15238 335 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 ZFAND6Q6FIF0 208 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 PRSS54Q6PEW0 395 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 HSD17B13Q7Z5P4 300 aaPredicted RBP9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 PPP1R27Q86WC6 154 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 SBSPONQ8IVN8 264 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 Q8N6K4 173 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 C5orf56Q8N8D9 126 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 RAB40CQ96S21 281 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 MCRIP2Q9BUT9 160 aaKnown RBP9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 GPR61Q9BZJ8 451 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 HSPB7Q9UBY9 170 aa9.15□□□□□ -0.94
CSNK1E-212ENST00000494610 CEBPZOSA8MTT3 80 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 MPTX1A8MV57 137 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 E5RGE8 158 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 DEDDO75618 318 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 MPC2O95563 127 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 IFNA17P01571 189 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 HNRNPCP07910 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 IL6RP08887 468 aaPredicted RBP9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 OR9G9P0C7N8 305 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 C4BPBP20851 252 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 HOXA1P49639 335 aaPredicted RBP9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 F2RL1P55085 397 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 TAS2R30P59541 319 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 ID3Q02535 119 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 IL15RAQ13261 267 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 RAB32Q13637 225 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 C5orf64Q2M2E5 130 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 LRRC37A5PQ49AS3 106 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 VKORC1L1Q8N0U8 176 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 OR1L8Q8NGR8 309 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 RASL11BQ9BPW5 248 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 SRSF8Q9BRL6 282 aaKnown RBP9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 PLEKHA3Q9HB20 300 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 NSG2Q9Y328 171 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 LSM5Q9Y4Y9 91 aaKnown RBP9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 OR51B2Q9Y5P1 312 aa9.14□□□□□ -0.95
CSNK1E-212ENST00000494610 FRAS1Q86XX4 4008 aa9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 FXYD6-FXYD2A0A087WZ82 144 aa9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 NCBP2LA6PVI3 153 aaKnown RBP9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 SRRM4A7MD48 611 aaKnown RBP9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 K7EPK0 472 aa9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 SYNGR2O43760 224 aa9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 MBPP02686 304 aaPredicted RBP9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 SLC25A4P12235 298 aa9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 OR2B8PP59922 312 aa9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 HSPE1P61604 102 aaKnown RBP9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 PRSS8Q16651 343 aa9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 NOXA1Q86UR1 476 aa9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 FAM71E2Q8N5Q1 922 aa9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 INO80EQ8NBZ0 244 aaPredicted RBP9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 RCHY1Q96PM5 261 aa9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 HIPK2Q9H2X6 1198 aa9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 WSB1Q9Y6I7 421 aa9.13□□□□□ -0.95
CSNK1E-212ENST00000494610 SORL1Q92673 2214 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 HMSDA8MTL9 139 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 SEC14L6B5MCN3 397 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 SSSCA1O60232 199 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 HLA-DRB1P01911 266 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 CRYGBP07316 175 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 LYL1P12980 280 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 RPL27AP46776 148 aaKnown RBP9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 ATP5IP56385 69 aaPredicted RBP9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 PRCDQ00LT1 54 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 TNXAQ16473 311 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 TMEM65Q6PI78 240 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 SLC35E3Q7Z769 313 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 STPG2Q8N412 459 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 DTD1Q8TEA8 209 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 DCUN1D4Q92564 292 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 QTRT1Q9BXR0 403 aaKnown RBP9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 KRTAP17-1Q9BYP8 105 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 SLC25A31Q9H0C2 315 aa9.12□□□□□ -0.95
CSNK1E-212ENST00000494610 FBXL15Q9H469 300 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms