RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 KIR2DS3Q14952 304 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 RSPO4Q2I0M5 234 aaPredicted RBP3.36□□□□□ -1.87
ATG3-207ENST00000494571 SPINK9Q5DT21 86 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 NMSQ5H8A3 153 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 IBA57Q5T440 356 aaKnown RBP3.36□□□□□ -1.87
ATG3-207ENST00000494571 PQLC2Q6ZP29 291 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 FAM19A5Q7Z5A7 132 aaPredicted RBP3.36□□□□□ -1.87
ATG3-207ENST00000494571 LYPD6Q86Y78 171 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 GAPTQ8N292 157 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 ZNF808Q8N4W9 903 aaPredicted RBP3.36□□□□□ -1.87
ATG3-207ENST00000494571 Q8TCH9 128 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 RDH5Q92781 318 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 DUX5Q96PT3 197 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 FAM173AQ9BQD7 235 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 PBOV1Q9GZY1 135 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 MAP1LC3AQ9H492 121 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 DEPPQ9NTK1 212 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 POLDIP2Q9Y2S7 368 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 SHANK1Q9Y566 2161 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 V9GYV3 84 aa3.36□□□□□ -1.87
ATG3-207ENST00000494571 POLR2AP24928 1970 aaKnown RBP3.36□□□□□ -1.87
ATG3-207ENST00000494571 RTTNQ86VV8 2226 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 TEX50A0A1B0GTY4 177 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 HSPB6O14558 160 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 SYNGR2O43760 224 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 NUDT14O95848 222 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 NCR2O95944 276 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 PPYP01298 95 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 ARL14EPLP0DKL9 152 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 OR1D5P58170 312 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 GNG5P63218 68 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 DEFB134Q4QY38 66 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 CENPWQ5EE01 88 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 TMEM42Q69YG0 159 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 NFE4Q86UQ8 179 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 OR5AS1Q8N127 324 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 OSR2Q8N2R0 312 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 ZADH2Q8N4Q0 377 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 LINC01465Q8N7H1 131 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 RBMXL3Q8N7X1 1067 aaKnown RBP3.35□□□□□ -1.87
ATG3-207ENST00000494571 VN1R2Q8NFZ6 395 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 C8orf44Q96CB5 159 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 C1orf147Q96MC9 270 aaPredicted RBP3.35□□□□□ -1.87
ATG3-207ENST00000494571 SPRY4Q9C004 299 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 ATG2BQ96BY7 2078 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 SCN3AQ9NY46 2000 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 TRAV4A0A0B4J268 109 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.35□□□□□ -1.87
ATG3-207ENST00000494571 SPRY1O43609 319 aaPredicted RBP3.35□□□□□ -1.87
ATG3-207ENST00000494571 FCN3O75636 299 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 RBP4P02753 201 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 OR9G9P0C7N8 305 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 YPEL5P62699 121 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 KISS1Q15726 138 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 KLF17Q5JT82 389 aaPredicted RBP3.35□□□□□ -1.87
ATG3-207ENST00000494571 TXNDC8Q6A555 127 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 DUX4L9Q6RFH8 374 aaPredicted RBP3.35□□□□□ -1.87
ATG3-207ENST00000494571 ZNF818PQ6ZRF7 136 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 ZNF295-AS1Q8N0V1 137 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 OR1L1Q8NH94 360 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 GTSF1Q8WW33 167 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 PRRG4Q9BZD6 226 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 FAM234AQ9H0X4 552 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 LYRM4Q9HD34 91 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 HEYLQ9NQ87 328 aaPredicted RBP3.35□□□□□ -1.87
ATG3-207ENST00000494571 KCNIP2Q9NS61 270 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 FZR1Q9UM11 496 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 NUP210LQ5VU65 1888 aa3.35□□□□□ -1.87
ATG3-207ENST00000494571 IGKV1D-42A0A075B6H8 117 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 TRAV9-1A0A075B6T8 112 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 LINC01548A6NM66 108 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 SMAD7O15105 426 aaKnown RBP3.34□□□□□ -1.87
ATG3-207ENST00000494571 EML2O95834 649 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 TNFRSF1AP19438 455 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 CLRN1P58418 232 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 FXYD7P58549 80 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 IL11RAQ14626 422 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 FAM120AOSQ5T036 256 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 FAM162BQ5T6X4 162 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 Q6ZQT7 251 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 Q6ZRM9 215 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 PPP1R32Q7Z5V6 425 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 IL1F10Q8WWZ1 152 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 H1FXQ92522 213 aaKnown RBP3.34□□□□□ -1.87
ATG3-207ENST00000494571 MBD6Q96DN6 1003 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 ASCL2Q99929 193 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 ZNF442Q9H7R0 627 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 CCL28Q9NRJ3 127 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 ZNF355PQ9NSJ1 428 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 KLK5Q9Y337 293 aaPredicted RBP3.34□□□□□ -1.87
ATG3-207ENST00000494571 PTRH2Q9Y3E5 179 aaKnown RBP3.34□□□□□ -1.87
ATG3-207ENST00000494571 YTHDF2Q9Y5A9 579 aaKnown RBP3.34□□□□□ -1.87
ATG3-207ENST00000494571 LAMA3Q16787 3333 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 LTBP2Q14767 1821 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 TRAV8-1A0A0A6YYK1 113 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 LOC107984156A0A0G2JMH3 177 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 C17orf51A8MQB3 221 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 A8MWL6 223 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 C21orf140B9A014 251 aa3.34□□□□□ -1.87
ATG3-207ENST00000494571 K7ESM1 405 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms