RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 KRTAP17-1Q9BYP8 105 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 IFT46Q9NQC8 304 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 COMMD9Q9P000 198 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 OR51B2Q9Y5P1 312 aa9.34□□□□□ -0.91
SKA1-205ENST00000494518 F11RQ9Y624 299 aaKnown RBP9.34□□□□□ -0.91
SKA1-205ENST00000494518 IGHV3OR16-13A0A075B7E8 117 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 IGHV3-74A0A0B4J1X5 117 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 OR4C46A6NHA9 309 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 K7EIM0 57 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 NDUFA4O00483 81 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 UBE2CO00762 179 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 IGHV3-48P01763 117 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 PMP2P02689 132 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 CD300LFQ8TDQ1 290 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 PHLDA1Q8WV24 401 aaPredicted RBP9.33□□□□□ -0.92
SKA1-205ENST00000494518 GIMAP1Q8WWP7 306 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 FCAMRQ8WWV6 532 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 FCGR1BQ92637 280 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 LSM10Q969L4 123 aaKnown RBP9.33□□□□□ -0.92
SKA1-205ENST00000494518 RNF2Q99496 336 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 ZNF2Q9BSG1 426 aaPredicted RBP9.33□□□□□ -0.92
SKA1-205ENST00000494518 FXYD6Q9H0Q3 95 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 DIABLOQ9NR28 239 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 NDUFA4L2Q9NRX3 87 aa9.33□□□□□ -0.92
SKA1-205ENST00000494518 KLK5Q9Y337 293 aaPredicted RBP9.33□□□□□ -0.92
SKA1-205ENST00000494518 DBX1A6NMT0 343 aa9.32□□□□□ -0.92
SKA1-205ENST00000494518 MRPS14O60783 128 aaKnown RBP9.32□□□□□ -0.92
SKA1-205ENST00000494518 PGLYRP1O75594 196 aaPredicted RBP9.32□□□□□ -0.92
SKA1-205ENST00000494518 YIF1AO95070 293 aa9.32□□□□□ -0.92
SKA1-205ENST00000494518 F2RP25116 425 aa9.32□□□□□ -0.92
SKA1-205ENST00000494518 TGFBR1P36897 503 aa9.32□□□□□ -0.92
SKA1-205ENST00000494518 NEDD8Q15843 81 aa9.32□□□□□ -0.92
SKA1-205ENST00000494518 THOC7Q6I9Y2 204 aaKnown RBP9.32□□□□□ -0.92
SKA1-205ENST00000494518 SPSB3Q6PJ21 355 aa9.32□□□□□ -0.92
SKA1-205ENST00000494518 GBGT1Q8N5D6 347 aa9.32□□□□□ -0.92
SKA1-205ENST00000494518 GALNT14Q96FL9 552 aa9.32□□□□□ -0.92
SKA1-205ENST00000494518 ZNF414Q96IQ9 312 aa9.32□□□□□ -0.92
SKA1-205ENST00000494518 MAP6D1Q9H9H5 199 aa9.32□□□□□ -0.92
SKA1-205ENST00000494518 A0A0A6YYH2 397 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 KIR2DL5BA0A0G2JN68 375 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 KIR2DL5BA0A0G2JPC4 375 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 A6NJ64 397 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 SNAPC5O75971 98 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 CBX5P45973 191 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 SCAND1P57086 179 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 NANOS2P60321 138 aaKnown RBP9.31□□□□□ -0.92
SKA1-205ENST00000494518 PHLDA2Q53GA4 152 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 KIR2DL5AQ8N109 375 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 TSPAN14Q8NG11 270 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 KIR2DL5BQ8NHK3 375 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 MOB3AQ96BX8 217 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 DGCR14Q96DF8 476 aaKnown RBP9.31□□□□□ -0.92
SKA1-205ENST00000494518 MISP3Q96FF7 219 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 RHPN1-AS1Q9BWJ2 59 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 FBXL17Q9UF56 701 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 SMPXQ9UHP9 88 aa9.31□□□□□ -0.92
SKA1-205ENST00000494518 IGHV7-4-1A0A0J9YVY3 117 aa9.3□□□□□ -0.92
SKA1-205ENST00000494518 K7EMT4 169 aa9.3□□□□□ -0.92
SKA1-205ENST00000494518 CHEK1O14757 476 aa9.3□□□□□ -0.92
SKA1-205ENST00000494518 DEFB4AO15263 64 aa9.3□□□□□ -0.92
SKA1-205ENST00000494518 CTSGP08311 255 aa9.3□□□□□ -0.92
SKA1-205ENST00000494518 HSD17B13Q7Z5P4 300 aaPredicted RBP9.3□□□□□ -0.92
SKA1-205ENST00000494518 TMEM217Q8N7C4 229 aa9.3□□□□□ -0.92
SKA1-205ENST00000494518 TMEM116Q8NCL8 245 aa9.3□□□□□ -0.92
SKA1-205ENST00000494518 OR5H2Q8NGV7 314 aa9.3□□□□□ -0.92
SKA1-205ENST00000494518 SLC25A46Q96AG3 418 aa9.3□□□□□ -0.92
SKA1-205ENST00000494518 C15orf62A8K5M9 175 aa9.29□□□□□ -0.92
SKA1-205ENST00000494518 XRCC3O43542 346 aa9.29□□□□□ -0.92
SKA1-205ENST00000494518 FGF2P09038 288 aa9.29□□□□□ -0.92
SKA1-205ENST00000494518 TAS2R20P59543 309 aa9.29□□□□□ -0.92
SKA1-205ENST00000494518 SPINK9Q5DT21 86 aa9.29□□□□□ -0.92
SKA1-205ENST00000494518 PINX1Q96BK5 328 aaKnown RBP9.29□□□□□ -0.92
SKA1-205ENST00000494518 TMEM56Q96MV1 263 aa9.29□□□□□ -0.92
SKA1-205ENST00000494518 RARRES2Q99969 163 aa9.29□□□□□ -0.92
SKA1-205ENST00000494518 C6orf62Q9GZU0 229 aaPredicted RBP9.29□□□□□ -0.92
SKA1-205ENST00000494518 CSTL1Q9H114 145 aa9.29□□□□□ -0.92
SKA1-205ENST00000494518 PRNDQ9UKY0 176 aa9.29□□□□□ -0.92
SKA1-205ENST00000494518 IGHV3-66A0A0C4DH42 116 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 C15orf61A6NNL5 157 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 MPTX1A8MV57 137 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 GPR31O00270 319 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 NUPL2O15504 423 aaKnown RBP9.28□□□□□ -0.92
SKA1-205ENST00000494518 HLA-DMAP28067 261 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 RELQ04864 619 aaPredicted RBP9.28□□□□□ -0.92
SKA1-205ENST00000494518 UBE2NLQ5JXB2 153 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 TMEM69Q5SWH9 247 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 DHRS11Q6UWP2 260 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 CMTM1Q8IZ96 169 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 SAMD12Q8N8I0 201 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 OR11H2Q8NH07 326 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 BORCS5Q969J3 196 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 S100A16Q96FQ6 103 aaKnown RBP9.28□□□□□ -0.92
SKA1-205ENST00000494518 TMEM14BQ9NUH8 114 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 ANAPC10Q9UM13 185 aa9.28□□□□□ -0.92
SKA1-205ENST00000494518 I3L2K1 104 aa9.27□□□□□ -0.93
SKA1-205ENST00000494518 ATP6V1G2O95670 118 aa9.27□□□□□ -0.93
SKA1-205ENST00000494518 MT-CO2P00403 227 aa9.27□□□□□ -0.93
SKA1-205ENST00000494518 APOHP02749 345 aaPredicted RBP9.27□□□□□ -0.93
SKA1-205ENST00000494518 ATF4P18848 351 aaPredicted RBP9.27□□□□□ -0.93
SKA1-205ENST00000494518 HRH1P35367 487 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms