RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 FAM74A7A6NL05 159 aa13.25□□□□□ -0.29
ATG4B-225ENST00000494465 VENTXO95231 258 aa13.25□□□□□ -0.29
ATG4B-225ENST00000494465 HOXB4P17483 251 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-225ENST00000494465 ERHP84090 104 aaKnown RBP13.25□□□□□ -0.29
ATG4B-225ENST00000494465 FAM74A3Q4VXF1 159 aa13.25□□□□□ -0.29
ATG4B-225ENST00000494465 MMD2Q8IY49 270 aa13.25□□□□□ -0.29
ATG4B-225ENST00000494465 TMA7Q9Y2S6 64 aaKnown RBP13.25□□□□□ -0.29
ATG4B-225ENST00000494465 HILPDAQ9Y5L2 63 aa13.25□□□□□ -0.29
ATG4B-225ENST00000494465 HMGB3O15347 200 aaKnown RBP13.25□□□□□ -0.29
ATG4B-225ENST00000494465 SNAPINO95295 136 aa13.25□□□□□ -0.29
ATG4B-225ENST00000494465 SRP19P09132 144 aaKnown RBP13.25□□□□□ -0.29
ATG4B-225ENST00000494465 PAX6P26367 422 aa13.25□□□□□ -0.29
ATG4B-225ENST00000494465 MLANAQ16655 118 aa13.25□□□□□ -0.29
ATG4B-225ENST00000494465 TEPPQ6URK8 271 aa13.25□□□□□ -0.29
ATG4B-225ENST00000494465 RAB24Q969Q5 203 aa13.25□□□□□ -0.29
ATG4B-225ENST00000494465 RNF5Q99942 180 aa13.25□□□□□ -0.29
ATG4B-225ENST00000494465 SVEP1Q4LDE5 3571 aa13.25□□□□□ -0.29
ATG4B-225ENST00000494465 A0A1W2PRD5 423 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 A0A1W2PRF3 423 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 A0A1W2PRM7 423 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 SOX15O60248 233 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 HSPB1P04792 205 aaKnown RBP13.24□□□□□ -0.29
ATG4B-225ENST00000494465 OR13C7P0DN81 318 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 PDLIM4P50479 330 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 SSBP2P81877 361 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-225ENST00000494465 PMS2P11Q13670 270 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 ACOT6Q3I5F7 207 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-225ENST00000494465 KHDC3LQ587J8 217 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 MIC13Q5XKP0 118 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 FAM122CQ6P4D5 195 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 SUN5Q8TC36 379 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 RXFP4Q8TDU9 374 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 ACTR3CQ9C0K3 210 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-225ENST00000494465 PXMP4Q9Y6I8 212 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 ABCA2Q9BZC7 2435 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 CRYBG3Q68DQ2 2970 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 IGLC7A0M8Q6 106 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 SEC14L6B5MCN3 397 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 FBP1P09467 338 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 CEACAM3P40198 252 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 PPP1R27Q86WC6 154 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 CLRN3Q8NCR9 226 aa13.24□□□□□ -0.29
ATG4B-225ENST00000494465 METTL1Q9UBP6 276 aaKnown RBP13.24□□□□□ -0.29
ATG4B-225ENST00000494465 IGKV1OR2-108A0A075B7D4 117 aa13.23□□□□□ -0.29
ATG4B-225ENST00000494465 NUPL2O15504 423 aaKnown RBP13.23□□□□□ -0.29
ATG4B-225ENST00000494465 BCL2P10415 239 aa13.23□□□□□ -0.29
ATG4B-225ENST00000494465 CD69Q07108 199 aa13.23□□□□□ -0.29
ATG4B-225ENST00000494465 GAMTQ14353 236 aa13.23□□□□□ -0.29
ATG4B-225ENST00000494465 FBLN7Q53RD9 439 aa13.23□□□□□ -0.29
ATG4B-225ENST00000494465 DYNAPQ8N1N2 210 aa13.23□□□□□ -0.29
ATG4B-225ENST00000494465 P2RX4Q99571 388 aa13.23□□□□□ -0.29
ATG4B-225ENST00000494465 ZFP92A6NM28 416 aa13.23□□□□□ -0.29
ATG4B-225ENST00000494465 COMPP49747 757 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-225ENST00000494465 TMEM144Q7Z5S9 345 aa13.23□□□□□ -0.29
ATG4B-225ENST00000494465 SSMEM1Q8WWF3 244 aa13.23□□□□□ -0.29
ATG4B-225ENST00000494465 TMPRSS5Q9H3S3 457 aa13.23□□□□□ -0.29
ATG4B-225ENST00000494465 FBXL15Q9H469 300 aa13.23□□□□□ -0.29
ATG4B-225ENST00000494465 CYB5BO43169 146 aa13.22□□□□□ -0.29
ATG4B-225ENST00000494465 MAS1LP35410 378 aa13.22□□□□□ -0.29
ATG4B-225ENST00000494465 TNXAQ16473 311 aa13.22□□□□□ -0.29
ATG4B-225ENST00000494465 TBX15Q96SF7 602 aa13.22□□□□□ -0.29
ATG4B-225ENST00000494465 FCN1O00602 326 aa13.22□□□□□ -0.29
ATG4B-225ENST00000494465 RPL27AP46776 148 aaKnown RBP13.22□□□□□ -0.29
ATG4B-225ENST00000494465 RPL29P47914 159 aaKnown RBP13.22□□□□□ -0.29
ATG4B-225ENST00000494465 CDC34P49427 236 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-225ENST00000494465 PRR20EP86478 221 aa13.22□□□□□ -0.29
ATG4B-225ENST00000494465 PRR20CP86479 221 aa13.22□□□□□ -0.29
ATG4B-225ENST00000494465 PRR20DP86480 221 aa13.22□□□□□ -0.29
ATG4B-225ENST00000494465 PRR20BP86481 221 aa13.22□□□□□ -0.29
ATG4B-225ENST00000494465 PRR20AP86496 221 aa13.22□□□□□ -0.29
ATG4B-225ENST00000494465 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
ATG4B-225ENST00000494465 STPG3Q8N7X2 389 aa13.22□□□□□ -0.29
ATG4B-225ENST00000494465 REG1AP05451 166 aa13.21□□□□□ -0.29
ATG4B-225ENST00000494465 SSX2Q16385 188 aa13.21□□□□□ -0.29
ATG4B-225ENST00000494465 SOHLH1Q5JUK2 328 aa13.21□□□□□ -0.29
ATG4B-225ENST00000494465 CYB561D1Q8N8Q1 229 aa13.21□□□□□ -0.29
ATG4B-225ENST00000494465 CACNG8Q8WXS5 425 aa13.21□□□□□ -0.29
ATG4B-225ENST00000494465 FNDC4Q9H6D8 234 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-225ENST00000494465 SPG11Q96JI7 2443 aa13.21□□□□□ -0.3
ATG4B-225ENST00000494465 TOX4O94842 621 aa13.21□□□□□ -0.3
ATG4B-225ENST00000494465 LINC00869P0C866 280 aa13.21□□□□□ -0.3
ATG4B-225ENST00000494465 AREGP15514 252 aa13.21□□□□□ -0.3
ATG4B-225ENST00000494465 CD24P25063 80 aa13.21□□□□□ -0.3
ATG4B-225ENST00000494465 GPX4P36969 197 aaPredicted RBP13.21□□□□□ -0.3
ATG4B-225ENST00000494465 B2MP61769 119 aa13.21□□□□□ -0.3
ATG4B-225ENST00000494465 MINOS1Q5TGZ0 78 aa13.21□□□□□ -0.3
ATG4B-225ENST00000494465 TMEM88Q6PEY1 159 aa13.21□□□□□ -0.3
ATG4B-225ENST00000494465 C10orf105Q8TEF2 133 aa13.21□□□□□ -0.3
ATG4B-225ENST00000494465 SLC45A2Q9UMX9 530 aa13.21□□□□□ -0.3
ATG4B-225ENST00000494465 POLR3KQ9Y2Y1 108 aaPredicted RBP13.21□□□□□ -0.3
ATG4B-225ENST00000494465 MINOS1-NBL1R4GNA1 71 aa13.21□□□□□ -0.3
ATG4B-225ENST00000494465 VWC2LB2RUY7 222 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 TEX22C9J3V5 150 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 ACTL6BO94805 426 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 SLC16A13Q7RTY0 426 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 ZNF114Q8NC26 417 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 RNASEH2CQ8TDP1 164 aaKnown RBP13.2□□□□□ -0.3
ATG4B-225ENST00000494465 FAM168AQ92567 244 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 KCNIP2Q9NS61 270 aa13.2□□□□□ -0.3
ATG4B-225ENST00000494465 FOXH1O75593 365 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms