RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 ZNF320A2RRD8 509 aa11.15□□□□□ -0.62
ATG4B-224ENST00000494132 PYDC2Q56P42 97 aa11.15□□□□□ -0.62
ATG4B-224ENST00000494132 FAM209BQ5JX69 171 aa11.15□□□□□ -0.62
ATG4B-224ENST00000494132 HSD17B13Q7Z5P4 300 aaPredicted RBP11.15□□□□□ -0.62
ATG4B-224ENST00000494132 CADM3Q8N126 398 aa11.15□□□□□ -0.62
ATG4B-224ENST00000494132 UBAC2Q8NBM4 344 aa11.15□□□□□ -0.62
ATG4B-224ENST00000494132 RNASE11Q8TAA1 199 aaKnown RBP11.15□□□□□ -0.62
ATG4B-224ENST00000494132 LHFPL5Q8TAF8 219 aa11.15□□□□□ -0.62
ATG4B-224ENST00000494132 THAP7Q9BT49 309 aaPredicted RBP11.15□□□□□ -0.62
ATG4B-224ENST00000494132 PRR13Q9NZ81 148 aa11.15□□□□□ -0.62
ATG4B-224ENST00000494132 THYN1Q9P016 225 aa11.15□□□□□ -0.62
ATG4B-224ENST00000494132 GPR132Q9UNW8 380 aa11.15□□□□□ -0.62
ATG4B-224ENST00000494132 COL7A1Q02388 2944 aa11.15□□□□□ -0.63
ATG4B-224ENST00000494132 TEX13DA0A0J9YY54 714 aaPredicted RBP11.14□□□□□ -0.63
ATG4B-224ENST00000494132 OR2T8A6NH00 312 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 C2orf70A6NJV1 201 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 UCP1P25874 307 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 S100A5P33763 92 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 HSPE1P61604 102 aaKnown RBP11.14□□□□□ -0.63
ATG4B-224ENST00000494132 PRCDQ00LT1 54 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 ZNF79Q15937 498 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 CD300EQ496F6 205 aaPredicted RBP11.14□□□□□ -0.63
ATG4B-224ENST00000494132 PLET1Q6UQ28 207 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 UNQ9165/PRO28630Q6UXU0 137 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 OR2C3Q8N628 320 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 DYNLRB2Q8TF09 96 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 MISP3Q96FF7 219 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 PRRT1Q99946 306 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 NAA60Q9H7X0 242 aa11.14□□□□□ -0.63
ATG4B-224ENST00000494132 A0A0B4J293 547 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 TMEM213A2RRL7 107 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 K7EIM0 57 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 CYB5BO43169 146 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 ST8SIA3O43173 380 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 TGOLN2O43493 480 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 IGHV3-48P01763 117 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 FRMD6-AS1P0C7T7 363 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 P0C879 139 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 FOLR2P14207 255 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 TM4SF20Q53R12 229 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 GPHB5Q86YW7 130 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 Q8N1Y9 231 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 SCARB1Q8WTV0 552 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 GLYATL2Q8WU03 294 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 TRIM63Q969Q1 353 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 TMEM230Q96A57 120 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 TMEM222Q9H0R3 208 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 PLEKHA3Q9HB20 300 aa11.13□□□□□ -0.63
ATG4B-224ENST00000494132 IGHV3OR16-8A0A075B7F1 116 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 IFNA17P01571 189 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 ETV6P41212 452 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 KLF9Q13886 244 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-224ENST00000494132 SURF2Q15527 256 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-224ENST00000494132 FAM106AQ4KMX7 169 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 Q56UQ5 140 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 LCN12Q6JVE5 192 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 Q6ZRM9 215 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 SBSPONQ8IVN8 264 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 SELENOHQ8IZQ5 122 aaKnown RBP11.12□□□□□ -0.63
ATG4B-224ENST00000494132 Q8N402 240 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 SLC35G3Q8N808 338 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 VN1R17PQ8TDU5 208 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 PINX1Q96BK5 328 aaKnown RBP11.12□□□□□ -0.63
ATG4B-224ENST00000494132 RRNAD1Q96FB5 475 aaKnown RBP11.12□□□□□ -0.63
ATG4B-224ENST00000494132 CHRDL1Q9BU40 450 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 SLC2A8Q9NY64 477 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 C21orf62Q9NYP8 219 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 SIGLEC8Q9NYZ4 499 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 SCP2D1Q9UJQ7 156 aa11.12□□□□□ -0.63
ATG4B-224ENST00000494132 HUWE1Q7Z6Z7 4374 aaKnown RBP11.12□□□□□ -0.63
ATG4B-224ENST00000494132 CRYM-AS1A6NIL9 109 aa11.11□□□□□ -0.63
ATG4B-224ENST00000494132 F8W735 103 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-224ENST00000494132 LGALS9O00182 355 aa11.11□□□□□ -0.63
ATG4B-224ENST00000494132 ATG12O94817 140 aa11.11□□□□□ -0.63
ATG4B-224ENST00000494132 NXPH3O95157 252 aa11.11□□□□□ -0.63
ATG4B-224ENST00000494132 IGHV4-30-4P0DP06 118 aa11.11□□□□□ -0.63
ATG4B-224ENST00000494132 AKR1C4P17516 323 aa11.11□□□□□ -0.63
ATG4B-224ENST00000494132 HOXA1P49639 335 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-224ENST00000494132 TMEM268Q5VZI3 342 aa11.11□□□□□ -0.63
ATG4B-224ENST00000494132 CCDC190Q86UF4 302 aa11.11□□□□□ -0.63
ATG4B-224ENST00000494132 OR1P1Q8NH06 330 aa11.11□□□□□ -0.63
ATG4B-224ENST00000494132 PDCD10Q9BUL8 212 aa11.11□□□□□ -0.63
ATG4B-224ENST00000494132 A8MWP6 167 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 I3L2K1 104 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 CDS2O95674 445 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 MT-CO2P00403 227 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 CBLN1P23435 193 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 ADMP35318 185 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 ERHP84090 104 aaKnown RBP11.1□□□□□ -0.63
ATG4B-224ENST00000494132 GUCA2BQ16661 112 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 DEFB114Q30KQ6 69 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 BTNL8Q6UX41 500 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 TOMM5Q8N4H5 51 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 UXS1Q8NBZ7 420 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 RBPMSQ93062 196 aaKnown RBP11.1□□□□□ -0.63
ATG4B-224ENST00000494132 WDR89Q96FK6 387 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-224ENST00000494132 WFDC10AQ9H1F0 79 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 MLXQ9UH92 298 aa11.1□□□□□ -0.63
ATG4B-224ENST00000494132 ZNF785A8K8V0 405 aa11.09□□□□□ -0.63
ATG4B-224ENST00000494132 ZNF701M0R085 212 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms