RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 S100A5P33763 92 aa17.19■□□□□ 0.34
SNIP1-203ENST00000493916 AKR1C2P52895 323 aa17.19■□□□□ 0.34
SNIP1-203ENST00000493916 HSPE1P61604 102 aaKnown RBP17.19■□□□□ 0.34
SNIP1-203ENST00000493916 SP6Q3SY56 376 aa17.19■□□□□ 0.34
SNIP1-203ENST00000493916 SLC25A24Q6NUK1 477 aa17.19■□□□□ 0.34
SNIP1-203ENST00000493916 OR2K2Q8NGT1 345 aa17.19■□□□□ 0.34
SNIP1-203ENST00000493916 OR1P1Q8NH06 330 aa17.19■□□□□ 0.34
SNIP1-203ENST00000493916 THAP7Q9BT49 309 aaPredicted RBP17.19■□□□□ 0.34
SNIP1-203ENST00000493916 NAA60Q9H7X0 242 aa17.19■□□□□ 0.34
SNIP1-203ENST00000493916 SCP2D1Q9UJQ7 156 aa17.19■□□□□ 0.34
SNIP1-203ENST00000493916 GPR132Q9UNW8 380 aa17.19■□□□□ 0.34
SNIP1-203ENST00000493916 LCN12Q6JVE5 192 aa17.18■□□□□ 0.34
SNIP1-203ENST00000493916 ADAMTSL5Q6ZMM2 481 aa17.18■□□□□ 0.34
SNIP1-203ENST00000493916 Q8N402 240 aa17.18■□□□□ 0.34
SNIP1-203ENST00000493916 OR2C3Q8N628 320 aa17.18■□□□□ 0.34
SNIP1-203ENST00000493916 ZNF114Q8NC26 417 aa17.18■□□□□ 0.34
SNIP1-203ENST00000493916 TRIM63Q969Q1 353 aa17.18■□□□□ 0.34
SNIP1-203ENST00000493916 ATP6V0BQ99437 205 aa17.18■□□□□ 0.34
SNIP1-203ENST00000493916 TMEM222Q9H0R3 208 aa17.18■□□□□ 0.34
SNIP1-203ENST00000493916 SORL1Q92673 2214 aa17.18■□□□□ 0.34
SNIP1-203ENST00000493916 C2orf70A6NJV1 201 aa17.17■□□□□ 0.34
SNIP1-203ENST00000493916 A8MWP6 167 aa17.17■□□□□ 0.34
SNIP1-203ENST00000493916 OR5AC1P0C628 307 aa17.17■□□□□ 0.34
SNIP1-203ENST00000493916 NHLRC4P0CG21 123 aaPredicted RBP17.17■□□□□ 0.34
SNIP1-203ENST00000493916 GPR183P32249 361 aa17.17■□□□□ 0.34
SNIP1-203ENST00000493916 IZUMO4Q1ZYL8 232 aa17.17■□□□□ 0.34
SNIP1-203ENST00000493916 FAM106AQ4KMX7 169 aa17.17■□□□□ 0.34
SNIP1-203ENST00000493916 PYDC2Q56P42 97 aa17.17■□□□□ 0.34
SNIP1-203ENST00000493916 CCDC190Q86UF4 302 aa17.17■□□□□ 0.34
SNIP1-203ENST00000493916 A0A0B4J293 547 aa17.16■□□□□ 0.34
SNIP1-203ENST00000493916 TEX13DA0A0J9YY54 714 aaPredicted RBP17.16■□□□□ 0.34
SNIP1-203ENST00000493916 CRYM-AS1A6NIL9 109 aa17.16■□□□□ 0.34
SNIP1-203ENST00000493916 CDS2O95674 445 aa17.16■□□□□ 0.34
SNIP1-203ENST00000493916 KLF9Q13886 244 aaPredicted RBP17.16■□□□□ 0.34
SNIP1-203ENST00000493916 ZNF79Q15937 498 aa17.16■□□□□ 0.34
SNIP1-203ENST00000493916 PLEKHA3Q9HB20 300 aa17.16■□□□□ 0.34
SNIP1-203ENST00000493916 INS-IGF2F8WCM5 200 aa17.15■□□□□ 0.34
SNIP1-203ENST00000493916 K7EIM0 57 aa17.15■□□□□ 0.34
SNIP1-203ENST00000493916 TGOLN2O43493 480 aa17.15■□□□□ 0.34
SNIP1-203ENST00000493916 AP3S2P59780 193 aa17.15■□□□□ 0.34
SNIP1-203ENST00000493916 DHODHQ02127 395 aa17.15■□□□□ 0.34
SNIP1-203ENST00000493916 C11orf87Q6NUJ2 197 aa17.15■□□□□ 0.34
SNIP1-203ENST00000493916 FAM219AQ8IW50 185 aa17.15■□□□□ 0.34
SNIP1-203ENST00000493916 SCARB1Q8WTV0 552 aa17.15■□□□□ 0.34
SNIP1-203ENST00000493916 GLYATL2Q8WU03 294 aa17.15■□□□□ 0.34
SNIP1-203ENST00000493916 RRNAD1Q96FB5 475 aaKnown RBP17.15■□□□□ 0.34
SNIP1-203ENST00000493916 BSCL2Q96G97 398 aaPredicted RBP17.15■□□□□ 0.34
SNIP1-203ENST00000493916 SCGB3A2Q96PL1 93 aa17.15■□□□□ 0.34
SNIP1-203ENST00000493916 MCUBQ9NWR8 336 aa17.15■□□□□ 0.34
SNIP1-203ENST00000493916 C21orf62Q9NYP8 219 aa17.15■□□□□ 0.34
SNIP1-203ENST00000493916 FOLR2P14207 255 aa17.14■□□□□ 0.33
SNIP1-203ENST00000493916 FAUP35544 74 aaKnown RBP17.14■□□□□ 0.33
SNIP1-203ENST00000493916 PLET1Q6UQ28 207 aa17.14■□□□□ 0.33
SNIP1-203ENST00000493916 Q8N1Y9 231 aa17.14■□□□□ 0.33
SNIP1-203ENST00000493916 LHFPL5Q8TAF8 219 aa17.14■□□□□ 0.33
SNIP1-203ENST00000493916 DYNLRB2Q8TF09 96 aa17.14■□□□□ 0.33
SNIP1-203ENST00000493916 RBPMSQ93062 196 aaKnown RBP17.14■□□□□ 0.33
SNIP1-203ENST00000493916 ZNF436Q9C0F3 470 aaPredicted RBP17.14■□□□□ 0.33
SNIP1-203ENST00000493916 ZC4H2Q9NQZ6 224 aa17.14■□□□□ 0.33
SNIP1-203ENST00000493916 TECRQ9NZ01 308 aaKnown RBP17.14■□□□□ 0.33
SNIP1-203ENST00000493916 A0A0G2JRQ6 117 aa17.13■□□□□ 0.33
SNIP1-203ENST00000493916 TMEM213A2RRL7 107 aa17.13■□□□□ 0.33
SNIP1-203ENST00000493916 ST8SIA3O43173 380 aa17.13■□□□□ 0.33
SNIP1-203ENST00000493916 ETV6P41212 452 aa17.13■□□□□ 0.33
SNIP1-203ENST00000493916 ERHP84090 104 aaKnown RBP17.13■□□□□ 0.33
SNIP1-203ENST00000493916 SPSB3Q6PJ21 355 aa17.13■□□□□ 0.33
SNIP1-203ENST00000493916 TOMM5Q8N4H5 51 aa17.13■□□□□ 0.33
SNIP1-203ENST00000493916 SLC35G3Q8N808 338 aa17.13■□□□□ 0.33
SNIP1-203ENST00000493916 RNASE11Q8TAA1 199 aaKnown RBP17.13■□□□□ 0.33
SNIP1-203ENST00000493916 DEDD2Q8WXF8 326 aa17.13■□□□□ 0.33
SNIP1-203ENST00000493916 TMEM230Q96A57 120 aa17.13■□□□□ 0.33
SNIP1-203ENST00000493916 ZNF320A2RRD8 509 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 IZUMO1RA6ND01 250 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 OR2T8A6NH00 312 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 F8W735 103 aaPredicted RBP17.12■□□□□ 0.33
SNIP1-203ENST00000493916 EDN2P20800 178 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 CBLN1P23435 193 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 DEFB114Q30KQ6 69 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 CD300EQ496F6 205 aaPredicted RBP17.12■□□□□ 0.33
SNIP1-203ENST00000493916 AARDQ4LEZ3 155 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 UNQ9165/PRO28630Q6UXU0 137 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 SGPP2Q8IWX5 399 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 SELENOHQ8IZQ5 122 aaKnown RBP17.12■□□□□ 0.33
SNIP1-203ENST00000493916 GALNT14Q96FL9 552 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 PDCD10Q9BUL8 212 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 PALMDQ9NP74 551 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 TMEM56-RWDD3S4R434 201 aa17.12■□□□□ 0.33
SNIP1-203ENST00000493916 IGHV3-21A0A0B4J1V1 117 aa17.11■□□□□ 0.33
SNIP1-203ENST00000493916 A8MZ25 164 aa17.11■□□□□ 0.33
SNIP1-203ENST00000493916 I3L2K1 104 aa17.11■□□□□ 0.33
SNIP1-203ENST00000493916 IFNA17P01571 189 aa17.11■□□□□ 0.33
SNIP1-203ENST00000493916 FRMD6-AS1P0C7T7 363 aa17.11■□□□□ 0.33
SNIP1-203ENST00000493916 SPINK9Q5DT21 86 aa17.11■□□□□ 0.33
SNIP1-203ENST00000493916 SPANXN2Q5MJ10 180 aa17.11■□□□□ 0.33
SNIP1-203ENST00000493916 IL22RA2Q969J5 263 aa17.11■□□□□ 0.33
SNIP1-203ENST00000493916 FCGR2BP31994 310 aaPredicted RBP17.1■□□□□ 0.33
SNIP1-203ENST00000493916 ELLP55199 621 aaPredicted RBP17.1■□□□□ 0.33
SNIP1-203ENST00000493916 TMEM268Q5VZI3 342 aa17.1■□□□□ 0.33
SNIP1-203ENST00000493916 Q6ZRM9 215 aa17.1■□□□□ 0.33
SNIP1-203ENST00000493916 GTSCR1Q86UQ5 136 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms