RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 OR4D10Q8NGI6 311 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 MRGPRFQ96AM1 343 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 CXorf58Q96LI9 332 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 TUBA4BQ9H853 241 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 ZMAT4Q9H898 229 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 MTFP1Q9UDX5 166 aa8.05□□□□□ -1.12
COL6A3-214ENST00000493608 NBEAL2Q6ZNJ1 2754 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 OR2T8A6NH00 312 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 LGALS9O00182 355 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 CD7P09564 240 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 CBLN1P23435 193 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 PTBP1P26599 531 aaKnown RBP eCLIP8.04□□□□□ -1.12
COL6A3-214ENST00000493608 PPP5CP53041 499 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 CD81P60033 236 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 MLANAQ16655 118 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 FAM209BQ5JX69 171 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 LCE4AQ5TA78 99 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 PLET1Q6UQ28 207 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 UNQ9165/PRO28630Q6UXU0 137 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 H2BFWTQ7Z2G1 175 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 UXS1Q8NBZ7 420 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 ZNF502Q8TBZ5 544 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 SEC22AQ96IW7 307 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 SRSF8Q9BRL6 282 aaKnown RBP8.04□□□□□ -1.12
COL6A3-214ENST00000493608 WFDC10AQ9H1F0 79 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 PLEKHA3Q9HB20 300 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 THYN1Q9P016 225 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 PRNDQ9UKY0 176 aa8.04□□□□□ -1.12
COL6A3-214ENST00000493608 IGHV3OR16-8A0A075B7F1 116 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 TMEM213A2RRL7 107 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 FGF2P09038 288 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 PIGPP57054 158 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 HAGHQ16775 308 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 SP6Q3SY56 376 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 SCGB2B2Q4G0G5 96 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 SPINK9Q5DT21 86 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 FAAP20Q6NZ36 180 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 LHFPL1Q86WI0 220 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 DEFB125Q8N687 156 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 OR2K2Q8NGT1 345 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 OR4A16Q8NH70 328 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 LSM10Q969L4 123 aaKnown RBP8.03□□□□□ -1.12
COL6A3-214ENST00000493608 NEURL2Q9BR09 285 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 TM2D3Q9BRN9 247 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 TMEM14BQ9NUH8 114 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 FKBP11Q9NYL4 201 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 MLXQ9UH92 298 aa8.03□□□□□ -1.12
COL6A3-214ENST00000493608 F11RQ9Y624 299 aaKnown RBP8.03□□□□□ -1.12
COL6A3-214ENST00000493608 C15orf61A6NNL5 157 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 A8MZ25 164 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 TGOLN2O43493 480 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 SCAF4O95104 1147 aaKnown RBP8.02□□□□□ -1.13
COL6A3-214ENST00000493608 RAB3DO95716 219 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 IGHV3-48P01763 117 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 TAS2R19P59542 299 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 ZNF57Q68EA5 555 aaPredicted RBP8.02□□□□□ -1.13
COL6A3-214ENST00000493608 THOC7Q6I9Y2 204 aaKnown RBP8.02□□□□□ -1.13
COL6A3-214ENST00000493608 STEAP1BQ6NZ63 245 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 BTNL8Q6UX41 500 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 HSD17B13Q7Z5P4 300 aaPredicted RBP8.02□□□□□ -1.13
COL6A3-214ENST00000493608 TMEM229BQ8NBD8 167 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 UBAC2Q8NBM4 344 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 OR5B3Q8NH48 314 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 MARCH1Q8TCQ1 289 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 DYNC2LI1Q8TCX1 351 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 VN1R17PQ8TDU5 208 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 SCARB1Q8WTV0 552 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 DIRAS2Q96HU8 199 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 TMEM56Q96MV1 263 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 TP53RKQ96S44 253 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 TSC22D3Q99576 134 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 CHRDL1Q9BU40 450 aa8.02□□□□□ -1.13
COL6A3-214ENST00000493608 FAM212BQ9NTI7 297 aaPredicted RBP8.02□□□□□ -1.13
COL6A3-214ENST00000493608 TECRQ9NZ01 308 aaKnown RBP8.02□□□□□ -1.13
COL6A3-214ENST00000493608 DNAH7Q8WXX0 4024 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 GABARAPH6UMI1 98 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 K7EIM0 57 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 CYB5BO43169 146 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 ZNF207O43670 478 aaKnown RBP8.01□□□□□ -1.13
COL6A3-214ENST00000493608 TPPPO94811 219 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 IGKV1-5P01602 117 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 CD74P04233 296 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 RND3P61587 244 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 IL18Q14116 193 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 Q56UQ5 140 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 TMEM61Q8N0U2 210 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 CADM3Q8N126 398 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 ARRDC1Q8N5I2 433 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 OR13C8Q8NGS7 320 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 TERB2Q8NHR7 220 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 RAB2BQ8WUD1 216 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 C15orf40Q8WUR7 153 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 C6orf62Q9GZU0 229 aaPredicted RBP8.01□□□□□ -1.13
COL6A3-214ENST00000493608 RETNQ9HD89 108 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 SLC2A8Q9NY64 477 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 C21orf62Q9NYP8 219 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 COPZ2Q9P299 210 aa8.01□□□□□ -1.13
COL6A3-214ENST00000493608 A0A0B4J293 547 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 C3orf85A0A1B0GTC6 90 aa8□□□□□ -1.13
COL6A3-214ENST00000493608 RBMY1BA6NDE4 496 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms