RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 OR2B8PP59922 312 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 UBE2MP61081 183 aaKnown RBP5.21□□□□□ -1.58
VPS52-219ENST00000493379 SUPT4H1P63272 117 aaKnown RBP5.21□□□□□ -1.58
VPS52-219ENST00000493379 FHL3Q13643 280 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 TMEM187Q14656 261 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 C2orf68Q2NKX9 166 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 PHLDA2Q53GA4 152 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 TMEM128Q5BJH2 165 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 CXorf66Q5JRM2 361 aaPredicted RBP5.21□□□□□ -1.58
VPS52-219ENST00000493379 XP32Q5T750 250 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 PVRIGQ6DKI7 326 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 CTRB2Q6GPI1 263 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 THOC7Q6I9Y2 204 aaKnown RBP5.21□□□□□ -1.58
VPS52-219ENST00000493379 FAAP20Q6NZ36 180 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 LCNL1Q6ZST4 164 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 HSD17B13Q7Z5P4 300 aaPredicted RBP5.21□□□□□ -1.58
VPS52-219ENST00000493379 FAM219AQ8IW50 185 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 VKORC1L1Q8N0U8 176 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 LRTM2Q8N967 370 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 CCDC71LQ8N9Z2 235 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 ADAD2Q8NCV1 583 aaKnown RBP5.21□□□□□ -1.58
VPS52-219ENST00000493379 OR4F17Q8NGA8 305 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 OR5B3Q8NH48 314 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 FAM110DQ8TAY7 271 aaPredicted RBP5.21□□□□□ -1.58
VPS52-219ENST00000493379 ABHD5Q8WTS1 349 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 R3HDM4Q96D70 268 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 OR4F4Q96R69 305 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 CLCC1Q96S66 551 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 P2RX4Q99571 388 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 TSC22D3Q99576 134 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 SPIN2AQ99865 258 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 SPIN2BQ9BPZ2 258 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 NDUFA4L2Q9NRX3 87 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 FKBP11Q9NYL4 201 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 COPZ2Q9P299 210 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 FOXA2Q9Y261 457 aaPredicted RBP5.21□□□□□ -1.58
VPS52-219ENST00000493379 VSIG4Q9Y279 399 aa5.21□□□□□ -1.58
VPS52-219ENST00000493379 TRAV3A0A0B4J244 114 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 PIGBOS1A0A0B4J2F0 54 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 TEX50A0A1B0GTY4 177 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 TCRBV4S1A1TA0A5B7 111 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 GAGE12BA1L429 117 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 GAGE12HA6NDE8 117 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 ATG12O94817 140 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 KRASP01116 189 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 IGKV1-5P01602 117 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 SERPINE2P07093 398 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 OR9G9P0C7N8 305 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 PGAM2P15259 253 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 HLA-GP17693 338 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 MYCNOSP40205 109 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 ICAM4Q14773 271 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 PLGLAQ15195 96 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 SCGB2B2Q4G0G5 96 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 OR2B11Q5JQS5 317 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 CASC10Q5T4H9 136 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 KPRPQ5T749 579 aaPredicted RBP5.2□□□□□ -1.58
VPS52-219ENST00000493379 UNQ5815/PRO19632Q6UWF5 114 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 SLC25A42Q86VD7 318 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 ZNF695Q8IW36 515 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 OR52E5Q8NH55 327 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 C4orf3Q8WVX3 66 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 LSM10Q969L4 123 aaKnown RBP5.2□□□□□ -1.58
VPS52-219ENST00000493379 USMG5Q96IX5 58 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 FAM103A1Q9BTL3 118 aaKnown RBP5.2□□□□□ -1.58
VPS52-219ENST00000493379 NAA60Q9H7X0 242 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 PARP11Q9NR21 331 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 AURKAIP1Q9NWT8 199 aaPredicted RBP5.2□□□□□ -1.58
VPS52-219ENST00000493379 COA4Q9NYJ1 87 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 PRNDQ9UKY0 176 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 C14orf166Q9Y224 244 aaKnown RBP5.2□□□□□ -1.58
VPS52-219ENST00000493379 KCNIP3Q9Y2W7 256 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 WSB1Q9Y6I7 421 aa5.2□□□□□ -1.58
VPS52-219ENST00000493379 A0A0B4J293 547 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 A0A0B4J2A0 478 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 A0A0G2JLM5 398 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 A0A1W2PN81 502 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 DUXBA0A1W2PPF3 345 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 IGLC7A0M8Q6 106 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 C15orf61A6NNL5 157 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 C3orf84H3BNL1 204 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 CNIH1O95406 144 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 OR5AC1P0C628 307 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 SLC25A6P12236 298 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 PSMB6P28072 239 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 G6PCP35575 357 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 CHRNA7P36544 502 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 RPL27AP46776 148 aaKnown RBP5.19□□□□□ -1.58
VPS52-219ENST00000493379 ERVK-16P61578 105 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 HSPE1P61604 102 aaKnown RBP5.19□□□□□ -1.58
VPS52-219ENST00000493379 IFITM3Q01628 133 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 ASAH1Q13510 395 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 RBMS2Q15434 407 aaKnown RBP5.19□□□□□ -1.58
VPS52-219ENST00000493379 TNXAQ16473 311 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 ZNF343Q6P1L6 599 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 SGPP2Q8IWX5 399 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 SELENOHQ8IZQ5 122 aaKnown RBP5.19□□□□□ -1.58
VPS52-219ENST00000493379 C11orf44Q8N8P7 122 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 DMBX1Q8NFW5 382 aa5.19□□□□□ -1.58
VPS52-219ENST00000493379 OR1L8Q8NGR8 309 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms