RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 DISC1C4P0D8 188 aa10.29□□□□□ -0.76
IRF1-210ENST00000493208 GABARAPH6UMI1 98 aa10.29□□□□□ -0.76
IRF1-210ENST00000493208 NDUFA4O00483 81 aa10.29□□□□□ -0.76
IRF1-210ENST00000493208 HLA-AP01891 365 aaKnown RBP10.29□□□□□ -0.76
IRF1-210ENST00000493208 CD5P06127 495 aa10.29□□□□□ -0.76
IRF1-210ENST00000493208 CMC4P56277 68 aaPredicted RBP10.29□□□□□ -0.76
IRF1-210ENST00000493208 PIGPP57054 158 aa10.29□□□□□ -0.76
IRF1-210ENST00000493208 TRIM16LQ309B1 348 aa10.29□□□□□ -0.76
IRF1-210ENST00000493208 SCGB2B2Q4G0G5 96 aa10.29□□□□□ -0.76
IRF1-210ENST00000493208 SLC35G3Q8N808 338 aa10.29□□□□□ -0.76
IRF1-210ENST00000493208 TMEM229BQ8NBD8 167 aa10.29□□□□□ -0.76
IRF1-210ENST00000493208 OR10W1Q8NGF6 305 aa10.29□□□□□ -0.76
IRF1-210ENST00000493208 C6orf62Q9GZU0 229 aaPredicted RBP10.29□□□□□ -0.76
IRF1-210ENST00000493208 TNCP24821 2201 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 A0A1B0GW64 132 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 OR2T8A6NH00 312 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 RAB3DO95716 219 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 MFAP4P55083 255 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 HSPE1P61604 102 aaKnown RBP10.28□□□□□ -0.76
IRF1-210ENST00000493208 PRCDQ00LT1 54 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 WT1-ASQ06250 92 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 SURF2Q15527 256 aaPredicted RBP10.28□□□□□ -0.76
IRF1-210ENST00000493208 HAGHQ16775 308 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 ZNF585BQ52M93 769 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 TERB2Q8NHR7 220 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 TMEM190Q8WZ59 177 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 SPAG8Q99932 426 aaPredicted RBP10.28□□□□□ -0.76
IRF1-210ENST00000493208 GINS3Q9BRX5 216 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 ZNF436Q9C0F3 470 aaPredicted RBP10.28□□□□□ -0.76
IRF1-210ENST00000493208 C5orf66Q9H5L9 145 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 KLK11Q9UBX7 282 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 NSG2Q9Y328 171 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 S4R3C0 116 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 TENM3Q9P273 2699 aa10.28□□□□□ -0.76
IRF1-210ENST00000493208 C3orf85A0A1B0GTC6 90 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 TMEM213A2RRL7 107 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 OR4C46A6NHA9 309 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 CGB1A6NKQ9 187 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 K7EMT4 169 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 M0QYG6 137 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 IFNA17P01571 189 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 CD3DP04234 171 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 NPBWR1P48145 328 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 TMBIM6P55061 237 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 RNASE12Q5GAN4 147 aaKnown RBP10.27□□□□□ -0.77
IRF1-210ENST00000493208 STEAP1BQ6NZ63 245 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 FAM219AQ8IW50 185 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 ZNF114Q8NC26 417 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 OR52I2Q8NH67 350 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 MRGPRFQ96AM1 343 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 MISP3Q96FF7 219 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 SEC22AQ96IW7 307 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 PRRT1Q99946 306 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 THAP7Q9BT49 309 aaPredicted RBP10.27□□□□□ -0.77
IRF1-210ENST00000493208 C20orf24Q9BUV8 137 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 SRD5A3Q9H8P0 318 aa10.27□□□□□ -0.77
IRF1-210ENST00000493208 RSL24D1Q9UHA3 163 aaKnown RBP10.27□□□□□ -0.77
IRF1-210ENST00000493208 TEX13DA0A0J9YY54 714 aaPredicted RBP10.26□□□□□ -0.77
IRF1-210ENST00000493208 C15orf62A8K5M9 175 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 GNG7O60262 68 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 AKAIN1P0CW23 69 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 SMIM18P0DKX4 95 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 PPP5CP53041 499 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 PAFAH1B2P68402 229 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 IL18Q14116 193 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 BTNL8Q6UX41 500 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 C19orf35Q6ZS72 473 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 CLVS1Q8IUQ0 354 aaPredicted RBP10.26□□□□□ -0.77
IRF1-210ENST00000493208 OR2C3Q8N628 320 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 DUSP18Q8NEJ0 188 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 SCARB1Q8WTV0 552 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 WDR89Q96FK6 387 aaPredicted RBP10.26□□□□□ -0.77
IRF1-210ENST00000493208 DIRAS2Q96HU8 199 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 HIPK2Q9H2X6 1198 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 TMEM231Q9H6L2 316 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 CCDC59Q9P031 241 aaKnown RBP10.26□□□□□ -0.77
IRF1-210ENST00000493208 SCP2D1Q9UJQ7 156 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 DMRT1Q9Y5R6 373 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 COL7A1Q02388 2944 aa10.26□□□□□ -0.77
IRF1-210ENST00000493208 LOC102724200A0A096LPH7 203 aaPredicted RBP10.25□□□□□ -0.77
IRF1-210ENST00000493208 IZUMO1RA6ND01 250 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 ZNF785A8K8V0 405 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 YIF1AO95070 293 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 SCAF4O95104 1147 aaKnown RBP10.25□□□□□ -0.77
IRF1-210ENST00000493208 CD74P04233 296 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 CTSDP07339 412 aaPredicted RBP10.25□□□□□ -0.77
IRF1-210ENST00000493208 C8orf88P0DMB2 117 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 FCGR2BP31994 310 aaPredicted RBP10.25□□□□□ -0.77
IRF1-210ENST00000493208 FAUP35544 74 aaKnown RBP10.25□□□□□ -0.77
IRF1-210ENST00000493208 HOXA1P49639 335 aaPredicted RBP10.25□□□□□ -0.77
IRF1-210ENST00000493208 APOC4P55056 127 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 DHODHQ02127 395 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 TM4SF20Q53R12 229 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 CASC10Q5T4H9 136 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 NOXA1Q86UR1 476 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 LHFPL1Q86WI0 220 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 TMEM61Q8N0U2 210 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 NARS2Q96I59 477 aaKnown RBP10.25□□□□□ -0.77
IRF1-210ENST00000493208 KCNIP3Q9Y2W7 256 aa10.25□□□□□ -0.77
IRF1-210ENST00000493208 TSPAN4O14817 238 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms