RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 GGTLC1Q9BX51 225 aa13.74□□□□□ -0.21
CHD1L-209ENST00000492728 PRNDQ9UKY0 176 aa13.74□□□□□ -0.21
CHD1L-209ENST00000492728 TRAV25A0A0B4J276 109 aa13.73□□□□□ -0.21
CHD1L-209ENST00000492728 M0QYG6 137 aa13.73□□□□□ -0.21
CHD1L-209ENST00000492728 ZNF207O43670 478 aaKnown RBP13.73□□□□□ -0.21
CHD1L-209ENST00000492728 RNASE12Q5GAN4 147 aaKnown RBP13.73□□□□□ -0.21
CHD1L-209ENST00000492728 OR1L6Q8NGR2 347 aa13.73□□□□□ -0.21
CHD1L-209ENST00000492728 OR5B3Q8NH48 314 aa13.73□□□□□ -0.21
CHD1L-209ENST00000492728 C5orf66Q9H5L9 145 aa13.73□□□□□ -0.21
CHD1L-209ENST00000492728 SCPEP1Q9HB40 452 aa13.73□□□□□ -0.21
CHD1L-209ENST00000492728 UBQLN2Q9UHD9 624 aa13.73□□□□□ -0.21
CHD1L-209ENST00000492728 SNAPC5O75971 98 aa13.72□□□□□ -0.21
CHD1L-209ENST00000492728 SMIM18P0DKX4 95 aa13.72□□□□□ -0.21
CHD1L-209ENST00000492728 RCVRNP35243 200 aa13.72□□□□□ -0.21
CHD1L-209ENST00000492728 TSPAN5P62079 268 aa13.72□□□□□ -0.21
CHD1L-209ENST00000492728 IZUMO4Q1ZYL8 232 aa13.72□□□□□ -0.21
CHD1L-209ENST00000492728 ODF3L2Q3SX64 289 aa13.72□□□□□ -0.21
CHD1L-209ENST00000492728 RBPMS2Q6ZRY4 209 aaKnown RBP13.72□□□□□ -0.21
CHD1L-209ENST00000492728 UBAC2Q8NBM4 344 aa13.72□□□□□ -0.21
CHD1L-209ENST00000492728 MRGPRFQ96AM1 343 aa13.72□□□□□ -0.21
CHD1L-209ENST00000492728 CMTM3Q96MX0 182 aa13.72□□□□□ -0.21
CHD1L-209ENST00000492728 DAZ1Q9NQZ3 744 aaKnown RBP13.72□□□□□ -0.21
CHD1L-209ENST00000492728 LOC102724200A0A096LPH7 203 aaPredicted RBP13.71□□□□□ -0.21
CHD1L-209ENST00000492728 NDUFA4O00483 81 aa13.71□□□□□ -0.21
CHD1L-209ENST00000492728 TSPAN4O14817 238 aa13.71□□□□□ -0.21
CHD1L-209ENST00000492728 UCP3P55916 312 aa13.71□□□□□ -0.21
CHD1L-209ENST00000492728 OR1P1Q8NH06 330 aa13.71□□□□□ -0.21
CHD1L-209ENST00000492728 SPAG8Q99932 426 aaPredicted RBP13.71□□□□□ -0.21
CHD1L-209ENST00000492728 C20orf24Q9BUV8 137 aa13.71□□□□□ -0.21
CHD1L-209ENST00000492728 FAM212BQ9NTI7 297 aaPredicted RBP13.71□□□□□ -0.21
CHD1L-209ENST00000492728 I3L2K1 104 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 CYB5BO43169 146 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 IGHV3-48P01763 117 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 CTSGP08311 255 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 PI3P19957 117 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 EWSR1Q01844 656 aaKnown RBP eCLIP13.7□□□□□ -0.22
CHD1L-209ENST00000492728 CTF1Q16619 201 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 ANKRD55Q3KP44 614 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 Q56UQ5 140 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 SPSB3Q6PJ21 355 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 SLC38A6Q8IZM9 456 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 OR2C3Q8N628 320 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 TMEM56Q96MV1 263 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 ATP6V0BQ99437 205 aa13.7□□□□□ -0.22
CHD1L-209ENST00000492728 SMIM31A0A1B0GVY4 71 aa13.69□□□□□ -0.22
CHD1L-209ENST00000492728 GABARAPO95166 117 aa13.69□□□□□ -0.22
CHD1L-209ENST00000492728 PRCDQ00LT1 54 aa13.69□□□□□ -0.22
CHD1L-209ENST00000492728 SPINK9Q5DT21 86 aa13.69□□□□□ -0.22
CHD1L-209ENST00000492728 LPCAT3Q6P1A2 487 aa13.69□□□□□ -0.22
CHD1L-209ENST00000492728 LHFPL1Q86WI0 220 aa13.69□□□□□ -0.22
CHD1L-209ENST00000492728 TSC22D3Q99576 134 aa13.69□□□□□ -0.22
CHD1L-209ENST00000492728 KLK11Q9UBX7 282 aa13.69□□□□□ -0.22
CHD1L-209ENST00000492728 IGKV1-5P01602 117 aa13.68□□□□□ -0.22
CHD1L-209ENST00000492728 P0C879 139 aa13.68□□□□□ -0.22
CHD1L-209ENST00000492728 H2BFWTQ7Z2G1 175 aa13.68□□□□□ -0.22
CHD1L-209ENST00000492728 ZNF114Q8NC26 417 aa13.68□□□□□ -0.22
CHD1L-209ENST00000492728 OR4D10Q8NGI6 311 aa13.68□□□□□ -0.22
CHD1L-209ENST00000492728 OR52I2Q8NH67 350 aa13.68□□□□□ -0.22
CHD1L-209ENST00000492728 MISP3Q96FF7 219 aa13.68□□□□□ -0.22
CHD1L-209ENST00000492728 TP53RKQ96S44 253 aa13.68□□□□□ -0.22
CHD1L-209ENST00000492728 FKBP11Q9NYL4 201 aa13.68□□□□□ -0.22
CHD1L-209ENST00000492728 IGHV3-49A0A0A0MS15 119 aa13.67□□□□□ -0.22
CHD1L-209ENST00000492728 K7EMT4 169 aa13.67□□□□□ -0.22
CHD1L-209ENST00000492728 MT-CO2P00403 227 aa13.67□□□□□ -0.22
CHD1L-209ENST00000492728 CD3DP04234 171 aa13.67□□□□□ -0.22
CHD1L-209ENST00000492728 CTSDP07339 412 aaPredicted RBP13.67□□□□□ -0.22
CHD1L-209ENST00000492728 RORCP51449 518 aa13.67□□□□□ -0.22
CHD1L-209ENST00000492728 RND3P61587 244 aa13.67□□□□□ -0.22
CHD1L-209ENST00000492728 OR4A16Q8NH70 328 aa13.67□□□□□ -0.22
CHD1L-209ENST00000492728 ABHD1Q96SE0 405 aa13.67□□□□□ -0.22
CHD1L-209ENST00000492728 RNF2Q99496 336 aa13.67□□□□□ -0.22
CHD1L-209ENST00000492728 C15orf62A8K5M9 175 aa13.66□□□□□ -0.22
CHD1L-209ENST00000492728 FAM25AB3EWG3 89 aa13.66□□□□□ -0.22
CHD1L-209ENST00000492728 FAM25CB3EWG5 89 aa13.66□□□□□ -0.22
CHD1L-209ENST00000492728 FAM25GB3EWG6 89 aa13.66□□□□□ -0.22
CHD1L-209ENST00000492728 FCGR2BP31994 310 aaPredicted RBP13.66□□□□□ -0.22
CHD1L-209ENST00000492728 HSPE1P61604 102 aaKnown RBP13.66□□□□□ -0.22
CHD1L-209ENST00000492728 ZNF124Q15973 351 aa13.66□□□□□ -0.22
CHD1L-209ENST00000492728 DEFB135Q30KP9 77 aa13.66□□□□□ -0.22
CHD1L-209ENST00000492728 IL17DQ8TAD2 202 aa13.66□□□□□ -0.22
CHD1L-209ENST00000492728 OR10C1Q96KK4 312 aa13.66□□□□□ -0.22
CHD1L-209ENST00000492728 EXTL2Q9UBQ6 330 aa13.66□□□□□ -0.22
CHD1L-209ENST00000492728 SMPXQ9UHP9 88 aa13.66□□□□□ -0.22
CHD1L-209ENST00000492728 A0A0G2JRQ6 117 aa13.65□□□□□ -0.22
CHD1L-209ENST00000492728 IGHV7-4-1A0A0J9YVY3 117 aa13.65□□□□□ -0.22
CHD1L-209ENST00000492728 CHEK1O14757 476 aa13.65□□□□□ -0.22
CHD1L-209ENST00000492728 PGAM2P15259 253 aa13.65□□□□□ -0.22
CHD1L-209ENST00000492728 S100GP29377 79 aa13.65□□□□□ -0.22
CHD1L-209ENST00000492728 PPP5CP53041 499 aa13.65□□□□□ -0.22
CHD1L-209ENST00000492728 PIGPP57054 158 aa13.65□□□□□ -0.22
CHD1L-209ENST00000492728 RNASE10Q5GAN6 216 aaKnown RBP13.65□□□□□ -0.22
CHD1L-209ENST00000492728 PINX1Q96BK5 328 aaKnown RBP13.65□□□□□ -0.22
CHD1L-209ENST00000492728 NXF2Q9GZY0 626 aaKnown RBP13.65□□□□□ -0.22
CHD1L-209ENST00000492728 MIXL1Q9H2W2 232 aa13.65□□□□□ -0.22
CHD1L-209ENST00000492728 IGHV3OR16-13A0A075B7E8 117 aa13.64□□□□□ -0.23
CHD1L-209ENST00000492728 IGHV3-74A0A0B4J1X5 117 aa13.64□□□□□ -0.23
CHD1L-209ENST00000492728 A0A0B4J293 547 aa13.64□□□□□ -0.23
CHD1L-209ENST00000492728 A0A0J9YWU9 116 aa13.64□□□□□ -0.23
CHD1L-209ENST00000492728 MFAP4P55083 255 aa13.64□□□□□ -0.23
CHD1L-209ENST00000492728 LAMTOR1Q6IAA8 161 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms