RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 WFDC10BQ8IUB3 73 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 MTURNQ8N3F0 131 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 LINC00311Q8N616 119 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 SLC35B4Q969S0 331 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 RETNLBQ9BQ08 111 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 LINC00467Q9BRT7 94 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 RBKSQ9H477 322 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 NHEJ1Q9H9Q4 299 aaPredicted RBP2.25□□□□□ -2.05
UBR4-215ENST00000492606 CALYQ9NYX4 217 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 ABCD2Q9UBJ2 740 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 DCDC2Q9UHG0 476 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 KCNIP3Q9Y2W7 256 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 PEX16Q9Y5Y5 336 aa2.25□□□□□ -2.05
UBR4-215ENST00000492606 A6NIZ1 184 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 FAM223BA6NKX1 122 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 J3QT63 122 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 ZNF701M0R085 212 aaPredicted RBP2.24□□□□□ -2.05
UBR4-215ENST00000492606 ISLRO14498 428 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 ZNF207O43670 478 aaKnown RBP2.24□□□□□ -2.05
UBR4-215ENST00000492606 TPST1O60507 370 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 ZNF780AO75290 641 aaPredicted RBP2.24□□□□□ -2.05
UBR4-215ENST00000492606 SOX14O95416 240 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 MT2AP02795 61 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 CRYGDP07320 174 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 ZNF137PP52743 207 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 PKNOX1P55347 436 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 ATP5IP56385 69 aaPredicted RBP2.24□□□□□ -2.05
UBR4-215ENST00000492606 RAP1BP61224 184 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 LIPEQ05469 1076 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 PLGLAQ15195 96 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 ACTL10Q5JWF8 245 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 ELP2Q6IA86 826 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 DRAM2Q6UX65 266 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 HSD17B13Q7Z5P4 300 aaPredicted RBP2.24□□□□□ -2.05
UBR4-215ENST00000492606 FAM223AQ8IWN6 122 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 NRMQ8IXM6 262 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 FTMTQ8N4E7 242 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 TMEM252Q8N6L7 170 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 LRRC75AQ8NAA5 344 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 ZNF439Q8NDP4 499 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 BAALCQ8WXS3 180 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 SPTSSAQ969W0 71 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 RPUSD4Q96CM3 377 aaKnown RBP2.24□□□□□ -2.05
UBR4-215ENST00000492606 SLC35E1Q96K37 410 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 PKIBQ9C010 78 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 LINC00574Q9H8X3 128 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 PRR34Q9NV39 138 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 C1orf109Q9NX04 203 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 UFC1Q9Y3C8 167 aa2.24□□□□□ -2.05
UBR4-215ENST00000492606 IGHV3OR16-13A0A075B7E8 117 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 TRAV5A0A0B4J249 113 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 TRAV39A0A0B4J263 110 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 IGKV3D-20A0A0C4DH25 116 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 OR5B21A6NL26 309 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 SIRPB1O00241 398 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 TAAR5O14804 337 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 OR2J3O76001 311 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 CPSF4O95639 269 aaKnown RBP2.23□□□□□ -2.05
UBR4-215ENST00000492606 PSKH1P11801 424 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 M6PRP20645 277 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 EVI2AP22794 236 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 HAAOP46952 286 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 CRISP3P54108 245 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 RPL38P63173 70 aaKnown RBP2.23□□□□□ -2.05
UBR4-215ENST00000492606 ARL6IP1Q15041 203 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 FAM83EQ2M2I3 478 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 TDRG1Q3Y452 100 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 MESTQ5EB52 335 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 C1orf100Q5SVJ3 147 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 RNASEKQ6P5S7 137 aaKnown RBP2.23□□□□□ -2.05
UBR4-215ENST00000492606 SASS6Q6UVJ0 657 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 SSX9Q7RTT3 188 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 CBR4Q8N4T8 237 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 OR4A15Q8NGL6 344 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 SEC22AQ96IW7 307 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 CHP1Q99653 195 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 NAT9Q9BTE0 207 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 MRPL20Q9BYC9 149 aaKnown RBP2.23□□□□□ -2.05
UBR4-215ENST00000492606 SELENOIQ9C0D9 397 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 TMEM27Q9HBJ8 222 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 ABCB9Q9NP78 766 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 BABAM2Q9NXR7 383 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 MTCH1Q9NZJ7 389 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 RCL1Q9Y2P8 373 aaKnown RBP2.23□□□□□ -2.05
UBR4-215ENST00000492606 URGCP-MRPS24S4R325 110 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 V9GY05 133 aa2.23□□□□□ -2.05
UBR4-215ENST00000492606 IGHV3-43A0A0B4J1X8 118 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 A0A0J9YXY3 114 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 LYRM9A8MSI8 78 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 A8MT66 165 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 E9PBE3 544 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 KLHL2O95198 593 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 MT1FP04733 61 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 C2P06681 752 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 IGHV3-43DP0DP04 118 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 ATP6V1B2P21281 511 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 IL3RAP26951 378 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 SSTR5P35346 364 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 RPS27P42677 84 aaKnown RBP2.22□□□□□ -2.05
UBR4-215ENST00000492606 FXYD7P58549 80 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms