RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ANKRD29Q8N6D5 301 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 OR13C4Q8NGS5 318 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 DCUN1D1Q96GG9 259 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 PRAP1Q96NZ9 151 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 ULBP3Q9BZM4 244 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 PRTFDC1Q9NRG1 225 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 FBXL12Q9NXK8 326 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 TP73-AS1Q9UF72 201 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 SLC22A13Q9Y226 551 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 SCAF11Q99590 1463 aaKnown RBP0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 CCDC88CQ9P219 2028 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 PTPRBP23467 1997 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 TRGV2A0A075B6R0 118 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 MEIS3P1A6NDR6 274 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 SMIM9A6NGZ8 99 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 ORC5O43913 435 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 CNIH1O95406 144 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 RPS4Y1P22090 263 aaKnown RBP0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 NFYAP23511 347 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 HIST1H2BOP23527 126 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 HIST1H2BBP33778 126 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 ZNF80P51504 273 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 HIST1H2BDP58876 126 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 HIST1H2BCP62807 126 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 CCL7P80098 99 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 SRSF6Q13247 344 aaKnown RBP0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 HIST2H2BEQ16778 126 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 KRTAP21-3Q3LHN1 58 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 SPOPLQ6IQ16 392 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 LPCAT3Q6P1A2 487 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 RPL22L1Q6P5R6 122 aaKnown RBP0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 ZNF563Q8TA94 476 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 RASSF5Q8WWW0 418 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 HIST1H2BHQ93079 126 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 TSPAN32Q96QS1 320 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 HIST1H2BNQ99877 126 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 HIST1H2BMQ99879 126 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 COMMD5Q9GZQ3 224 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 DCSTAMPQ9H295 470 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 C11orf68Q9H3H3 251 aaKnown RBP0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 BAIAP2Q9UQB8 552 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 TMEM56-RWDD3S4R434 201 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 MED13Q9UHV7 2174 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 PTPRSQ13332 1948 aa0.95□□□□□ -2.26
HMGB1P30-201ENST00000492455 CR1P17927 2039 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 HEATR5AQ86XA9 2040 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 TRAV26-2A0A0B4J265 109 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 FAM236DA0A1B0GTK5 79 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 EXOC1LA0A1B0GW35 172 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 IBA57-AS1B1ANH7 110 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 TMEM114B3SHH9 223 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 HAND1O96004 215 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 CTXN2P0C2S0 81 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 FAM236CP0DP71 79 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 DEFA1P59665 94 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 AP3S2P59780 193 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 ERVS71-1P61550 626 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 FADDQ13158 208 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 EDDM3AQ14507 147 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 Q1T7F1 81 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 IAH1Q2TAA2 248 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 ARHGAP11BQ3KRB8 267 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 C7orf65Q6ZTY9 151 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 DHFR2Q86XF0 187 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 C10orf126Q8N4M7 172 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 OR8B3Q8NGG8 313 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 C11orf40Q8WZ69 217 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 ITFG2Q969R8 447 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 BORCS7Q96B45 105 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 TOMM6Q96B49 74 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 Q96M85 177 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 C20orf27Q9GZN8 174 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 CST9LQ9H4G1 147 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 PRELID3BQ9Y3B1 194 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 LHFPL6Q9Y693 200 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 NUP155O75694 1391 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 KIF24Q5T7B8 1368 aa0.94□□□□□ -2.26
HMGB1P30-201ENST00000492455 RP1P56715 2156 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 RALGAPA2Q2PPJ7 1873 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 MEIKINA0A087WXM9 373 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 DPRXA6NFQ7 191 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 TMEM210A6NLX4 147 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 F8W036 122 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 CRYZL1O95825 349 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 CLPSP04118 112 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 METTL15P1P0C7V9 234 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 SMIM10L2AP0DMW4 78 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 SMIM10L2BP0DMW5 78 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 GPX2P18283 190 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 ANP32AP39687 249 aaKnown RBP0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 AKR1C3P42330 323 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 EIF2B2P49770 351 aaKnown RBP0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 HIST1H3AP68431 136 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 H3F3AP84243 136 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 RUNX1Q01196 453 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 STX5Q13190 355 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 ZNF345Q14585 488 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 CDK10Q15131 360 aa0.93□□□□□ -2.26
HMGB1P30-201ENST00000492455 NDUFA5Q16718 116 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms