RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 IGHV4-30-4P0DP06 118 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 RPA2P15927 270 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 RAB3BP20337 219 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 PSMA1P25786 263 aaKnown RBP7□□□□□ -1.29
HDAC3-212ENST00000492407 RPS16P62249 146 aaKnown RBP7□□□□□ -1.29
HDAC3-212ENST00000492407 HLA-DRB3P79483 266 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 FXYD3Q14802 87 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 SPHARQ15513 63 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 DMRTA1Q5VZB9 504 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 OR10K2Q6IF99 312 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 PRSS48Q7RTY5 328 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 CEACAM19Q7Z692 300 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 C5orf24Q7Z6I8 188 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 BPIFB6Q8NFQ5 453 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 SCARB1Q8WTV0 552 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 RBMXL1Q96E39 390 aaKnown RBP7□□□□□ -1.29
HDAC3-212ENST00000492407 C5orf30Q96GV9 206 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 ABHD14BQ96IU4 210 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 NICN1Q9BSH3 213 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 LPAR5Q9H1C0 372 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 AK3Q9UIJ7 227 aa7□□□□□ -1.29
HDAC3-212ENST00000492407 TMEM213A2RRL7 107 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 M0R143 59 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 RBMXL2O75526 392 aaKnown RBP6.99□□□□□ -1.29
HDAC3-212ENST00000492407 ARL6IP5O75915 188 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 IGHV3-11P01762 117 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 IGKV1-16P04430 117 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 CRYGBP07316 175 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 FGF2P09038 288 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 TPBGQ13641 420 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 VAMP3Q15836 100 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 C5orf47Q569G3 176 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 GLDNQ6ZMI3 551 aaPredicted RBP6.99□□□□□ -1.29
HDAC3-212ENST00000492407 TMED4Q7Z7H5 227 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 OR10W1Q8NGF6 305 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 OR4A4PQ8NGN8 299 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 OR2K2Q8NGT1 345 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 TERB2Q8NHR7 220 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 IL17DQ8TAD2 202 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 DYNC2LI1Q8TCX1 351 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 RNASE8Q8TDE3 154 aaKnown RBP6.99□□□□□ -1.29
HDAC3-212ENST00000492407 MS4A10Q96PG2 267 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 CLCC1Q96S66 551 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 SPATA25Q9BR10 227 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 FAM103A1Q9BTL3 118 aaKnown RBP6.99□□□□□ -1.29
HDAC3-212ENST00000492407 SRRQ9GZT4 340 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 GEMIN7Q9H840 131 aaKnown RBP6.99□□□□□ -1.29
HDAC3-212ENST00000492407 EDA2RQ9HAV5 297 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 SCN3BQ9NY72 215 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 LSM2Q9Y333 95 aaKnown RBP6.99□□□□□ -1.29
HDAC3-212ENST00000492407 BOLA1Q9Y3E2 137 aa6.99□□□□□ -1.29
HDAC3-212ENST00000492407 HUWE1Q7Z6Z7 4374 aaKnown RBP6.99□□□□□ -1.29
HDAC3-212ENST00000492407 A0A0A6YYD4 124 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 A0A1B0GW15 77 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 SOCS1O15524 211 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 AIREO43918 545 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 CNIH1O95406 144 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 SCTP09683 121 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 PVALBP20472 110 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-212ENST00000492407 TMEM50BP56557 158 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 SELENOTP62341 195 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 RPL19P84098 196 aaKnown RBP6.98□□□□□ -1.29
HDAC3-212ENST00000492407 SSX1Q16384 188 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 SRSF7Q16629 238 aaKnown RBP eCLIP6.98□□□□□ -1.29
HDAC3-212ENST00000492407 COX19Q49B96 90 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 TMEM177Q53S58 311 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 CST9LP1Q5W188 147 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 LCN12Q6JVE5 192 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 ZNF343Q6P1L6 599 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 IL34Q6ZMJ4 242 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 Q8N402 240 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 OR9G4Q8NGQ1 327 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 ADTRPQ96IZ2 230 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 CYYR1Q96J86 154 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 LINC00052Q96N35 136 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 CMSS1Q9BQ75 279 aaKnown RBP6.98□□□□□ -1.29
HDAC3-212ENST00000492407 PARP12Q9H0J9 701 aaKnown RBP6.98□□□□□ -1.29
HDAC3-212ENST00000492407 GPN1Q9HCN4 374 aaPredicted RBP6.98□□□□□ -1.29
HDAC3-212ENST00000492407 ZNF355PQ9NSJ1 428 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 OR1A1Q9P1Q5 309 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 SORL1Q92673 2214 aa6.98□□□□□ -1.29
HDAC3-212ENST00000492407 DYNC2H1Q8NCM8 4307 aaKnown RBP6.97□□□□□ -1.29
HDAC3-212ENST00000492407 IGKV1-6A0A0C4DH72 117 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 FBLL1A6NHQ2 334 aaKnown RBP6.97□□□□□ -1.29
HDAC3-212ENST00000492407 OR2A4O95047 310 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 IGLV2-23P01705 113 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 NPSP0C0P6 89 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 ZNF182P17025 639 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-212ENST00000492407 HLA-GP17693 338 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 MAP2K4P45985 399 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 INSL4Q14641 139 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 IRF3Q14653 427 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 Q6ZS49 121 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 GTSCR1Q86UQ5 136 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 LAX1Q8IWV1 398 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 TEX45Q8NA69 505 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 COQ8AQ8NI60 647 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 CASTOR1Q8WTX7 329 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 ARHGAP5-AS1Q96IT6 56 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 CABLES2Q9BTV7 478 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms