RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 AKR1C2P52895 323 aa18.69■□□□□ 0.58
UPF3A-209ENST00000492270 TRIM16LQ309B1 348 aa18.69■□□□□ 0.58
UPF3A-209ENST00000492270 SPINK9Q5DT21 86 aa18.69■□□□□ 0.58
UPF3A-209ENST00000492270 LCN12Q6JVE5 192 aa18.69■□□□□ 0.58
UPF3A-209ENST00000492270 Q8N402 240 aa18.69■□□□□ 0.58
UPF3A-209ENST00000492270 OR51S1Q8NGJ8 323 aa18.69■□□□□ 0.58
UPF3A-209ENST00000492270 THAP7Q9BT49 309 aaPredicted RBP18.69■□□□□ 0.58
UPF3A-209ENST00000492270 IGHV3-35A0A0C4DH35 117 aa18.68■□□□□ 0.58
UPF3A-209ENST00000492270 CYB5BO43169 146 aa18.68■□□□□ 0.58
UPF3A-209ENST00000492270 NHLRC4P0CG21 123 aaPredicted RBP18.68■□□□□ 0.58
UPF3A-209ENST00000492270 FOLR2P14207 255 aa18.68■□□□□ 0.58
UPF3A-209ENST00000492270 UCP1P25874 307 aa18.68■□□□□ 0.58
UPF3A-209ENST00000492270 PRCDQ00LT1 54 aa18.68■□□□□ 0.58
UPF3A-209ENST00000492270 CD300EQ496F6 205 aaPredicted RBP18.68■□□□□ 0.58
UPF3A-209ENST00000492270 SBSPONQ8IVN8 264 aa18.68■□□□□ 0.58
UPF3A-209ENST00000492270 VN1R17PQ8TDU5 208 aa18.68■□□□□ 0.58
UPF3A-209ENST00000492270 C5orf66Q9H5L9 145 aa18.68■□□□□ 0.58
UPF3A-209ENST00000492270 C14orf166Q9Y224 244 aaKnown RBP18.68■□□□□ 0.58
UPF3A-209ENST00000492270 A0A0G2JRQ6 117 aa18.67■□□□□ 0.58
UPF3A-209ENST00000492270 ZNF320A2RRD8 509 aa18.67■□□□□ 0.58
UPF3A-209ENST00000492270 TMEM213A2RRL7 107 aa18.67■□□□□ 0.58
UPF3A-209ENST00000492270 K7EIM0 57 aa18.67■□□□□ 0.58
UPF3A-209ENST00000492270 HSPE1P61604 102 aaKnown RBP18.67■□□□□ 0.58
UPF3A-209ENST00000492270 UNQ9165/PRO28630Q6UXU0 137 aa18.67■□□□□ 0.58
UPF3A-209ENST00000492270 OR2C3Q8N628 320 aa18.67■□□□□ 0.58
UPF3A-209ENST00000492270 DYNLRB2Q8TF09 96 aa18.67■□□□□ 0.58
UPF3A-209ENST00000492270 A0A0B4J293 547 aa18.66■□□□□ 0.58
UPF3A-209ENST00000492270 OR2T8A6NH00 312 aa18.66■□□□□ 0.58
UPF3A-209ENST00000492270 A8MWP6 167 aa18.66■□□□□ 0.58
UPF3A-209ENST00000492270 OR5AC1P0C628 307 aa18.66■□□□□ 0.58
UPF3A-209ENST00000492270 IGHV4-30-4P0DP06 118 aa18.66■□□□□ 0.58
UPF3A-209ENST00000492270 SURF2Q15527 256 aaPredicted RBP18.66■□□□□ 0.58
UPF3A-209ENST00000492270 FAM106AQ4KMX7 169 aa18.66■□□□□ 0.58
UPF3A-209ENST00000492270 PLET1Q6UQ28 207 aa18.66■□□□□ 0.58
UPF3A-209ENST00000492270 SCARB1Q8WTV0 552 aa18.66■□□□□ 0.58
UPF3A-209ENST00000492270 PRRT1Q99946 306 aa18.66■□□□□ 0.58
UPF3A-209ENST00000492270 GPR132Q9UNW8 380 aa18.66■□□□□ 0.58
UPF3A-209ENST00000492270 V9GYH0 126 aa18.66■□□□□ 0.58
UPF3A-209ENST00000492270 F8W735 103 aaPredicted RBP18.65■□□□□ 0.58
UPF3A-209ENST00000492270 TGOLN2O43493 480 aa18.65■□□□□ 0.58
UPF3A-209ENST00000492270 DEFB114Q30KQ6 69 aa18.65■□□□□ 0.58
UPF3A-209ENST00000492270 OR2K2Q8NGT1 345 aa18.65■□□□□ 0.58
UPF3A-209ENST00000492270 OR1P1Q8NH06 330 aa18.65■□□□□ 0.58
UPF3A-209ENST00000492270 LHFPL5Q8TAF8 219 aa18.65■□□□□ 0.58
UPF3A-209ENST00000492270 TMEM222Q9H0R3 208 aa18.65■□□□□ 0.58
UPF3A-209ENST00000492270 NAA60Q9H7X0 242 aa18.65■□□□□ 0.58
UPF3A-209ENST00000492270 U3KQK5 164 aa18.65■□□□□ 0.58
UPF3A-209ENST00000492270 ST8SIA3O43173 380 aa18.64■□□□□ 0.57
UPF3A-209ENST00000492270 CBLN1P23435 193 aa18.64■□□□□ 0.57
UPF3A-209ENST00000492270 TM4SF20Q53R12 229 aa18.64■□□□□ 0.57
UPF3A-209ENST00000492270 PLEKHA3Q9HB20 300 aa18.64■□□□□ 0.57
UPF3A-209ENST00000492270 SLC2A8Q9NY64 477 aa18.64■□□□□ 0.57
UPF3A-209ENST00000492270 C21orf62Q9NYP8 219 aa18.64■□□□□ 0.57
UPF3A-209ENST00000492270 TEX13DA0A0J9YY54 714 aaPredicted RBP18.63■□□□□ 0.57
UPF3A-209ENST00000492270 SGPP2Q8IWX5 399 aa18.63■□□□□ 0.57
UPF3A-209ENST00000492270 UBAC2Q8NBM4 344 aa18.63■□□□□ 0.57
UPF3A-209ENST00000492270 ZNF114Q8NC26 417 aa18.63■□□□□ 0.57
UPF3A-209ENST00000492270 OR1L6Q8NGR2 347 aa18.63■□□□□ 0.57
UPF3A-209ENST00000492270 GLYATL2Q8WU03 294 aa18.63■□□□□ 0.57
UPF3A-209ENST00000492270 TRIM63Q969Q1 353 aa18.63■□□□□ 0.57
UPF3A-209ENST00000492270 MISP3Q96FF7 219 aa18.63■□□□□ 0.57
UPF3A-209ENST00000492270 CHRDL1Q9BU40 450 aa18.63■□□□□ 0.57
UPF3A-209ENST00000492270 MCUBQ9NWR8 336 aa18.63■□□□□ 0.57
UPF3A-209ENST00000492270 HUWE1Q7Z6Z7 4374 aaKnown RBP18.63■□□□□ 0.57
UPF3A-209ENST00000492270 CRYM-AS1A6NIL9 109 aa18.62■□□□□ 0.57
UPF3A-209ENST00000492270 ZNF785A8K8V0 405 aa18.62■□□□□ 0.57
UPF3A-209ENST00000492270 B3GALNT1O75752 331 aa18.62■□□□□ 0.57
UPF3A-209ENST00000492270 ATG12O94817 140 aa18.62■□□□□ 0.57
UPF3A-209ENST00000492270 CDS2O95674 445 aa18.62■□□□□ 0.57
UPF3A-209ENST00000492270 ZNF79Q15937 498 aa18.62■□□□□ 0.57
UPF3A-209ENST00000492270 PYDC2Q56P42 97 aa18.62■□□□□ 0.57
UPF3A-209ENST00000492270 Q6ZRM9 215 aa18.62■□□□□ 0.57
UPF3A-209ENST00000492270 GTSCR1Q86UQ5 136 aa18.62■□□□□ 0.57
UPF3A-209ENST00000492270 RNASE11Q8TAA1 199 aaKnown RBP18.62■□□□□ 0.57
UPF3A-209ENST00000492270 TMEM230Q96A57 120 aa18.62■□□□□ 0.57
UPF3A-209ENST00000492270 WDR89Q96FK6 387 aaPredicted RBP18.62■□□□□ 0.57
UPF3A-209ENST00000492270 BSCL2Q96G97 398 aaPredicted RBP18.62■□□□□ 0.57
UPF3A-209ENST00000492270 ZNF436Q9C0F3 470 aaPredicted RBP18.62■□□□□ 0.57
UPF3A-209ENST00000492270 C19orf73Q9NVV2 129 aa18.62■□□□□ 0.57
UPF3A-209ENST00000492270 MLXQ9UH92 298 aa18.62■□□□□ 0.57
UPF3A-209ENST00000492270 TENM3Q9P273 2699 aa18.61■□□□□ 0.57
UPF3A-209ENST00000492270 ADMP35318 185 aa18.61■□□□□ 0.57
UPF3A-209ENST00000492270 Q56UQ5 140 aa18.61■□□□□ 0.57
UPF3A-209ENST00000492270 SLC35G3Q8N808 338 aa18.61■□□□□ 0.57
UPF3A-209ENST00000492270 UXS1Q8NBZ7 420 aa18.61■□□□□ 0.57
UPF3A-209ENST00000492270 RRNAD1Q96FB5 475 aaKnown RBP18.61■□□□□ 0.57
UPF3A-209ENST00000492270 TECRQ9NZ01 308 aaKnown RBP18.61■□□□□ 0.57
UPF3A-209ENST00000492270 SCP2D1Q9UJQ7 156 aa18.61■□□□□ 0.57
UPF3A-209ENST00000492270 I3L2K1 104 aa18.6■□□□□ 0.57
UPF3A-209ENST00000492270 IFNA17P01571 189 aa18.6■□□□□ 0.57
UPF3A-209ENST00000492270 IGHV3-48P01763 117 aa18.6■□□□□ 0.57
UPF3A-209ENST00000492270 KLF9Q13886 244 aaPredicted RBP18.6■□□□□ 0.57
UPF3A-209ENST00000492270 CCDC190Q86UF4 302 aa18.6■□□□□ 0.57
UPF3A-209ENST00000492270 SELENOHQ8IZQ5 122 aaKnown RBP18.6■□□□□ 0.57
UPF3A-209ENST00000492270 TMEM190Q8WZ59 177 aa18.6■□□□□ 0.57
UPF3A-209ENST00000492270 PRR13Q9NZ81 148 aa18.6■□□□□ 0.57
UPF3A-209ENST00000492270 STAB2Q8WWQ8 2551 aa18.6■□□□□ 0.57
UPF3A-209ENST00000492270 A8MZ25 164 aa18.59■□□□□ 0.57
UPF3A-209ENST00000492270 ZNF701M0R085 212 aaPredicted RBP18.59■□□□□ 0.57
UPF3A-209ENST00000492270 MT-CO2P00403 227 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms