RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 MRPL36Q9P0J6 103 aaKnown RBP6.61□□□□□ -1.35
HDAC3-211ENST00000491581 A0A0A6YYH2 397 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 TRBV7-1A0A0A6YYK4 115 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 A0A0G2JRQ6 117 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 A6NJ64 397 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 CTSDP07339 412 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-211ENST00000491581 HIST1H1BP16401 226 aaKnown RBP6.6□□□□□ -1.35
HDAC3-211ENST00000491581 PTBP1P26599 531 aaKnown RBP eCLIP6.6□□□□□ -1.35
HDAC3-211ENST00000491581 PRSS3P35030 304 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 SCAND1P57086 179 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 MSMO1Q15800 293 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 MLANAQ16655 118 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 Q56UQ5 140 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 FAAP20Q6NZ36 180 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 LAX1Q8IWV1 398 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 GBGT1Q8N5D6 347 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 OR1L6Q8NGR2 347 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 SLC25A46Q96AG3 418 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 MISP3Q96FF7 219 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 CXorf58Q96LI9 332 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 RNF2Q99496 336 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 GGTLC1Q9BX51 225 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 KLK11Q9UBX7 282 aa6.6□□□□□ -1.35
HDAC3-211ENST00000491581 F11RQ9Y624 299 aaKnown RBP6.6□□□□□ -1.35
HDAC3-211ENST00000491581 BIRC6Q9NR09 4857 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 LOC102724200A0A096LPH7 203 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-211ENST00000491581 J3QL48 77 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 GPR31O00270 319 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 DHFRP00374 187 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 IGKV1-5P01602 117 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 CTSGP08311 255 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 SMIM18P0DKX4 95 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 CBX5P45973 191 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 SP6Q3SY56 376 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 RBPMS2Q6ZRY4 209 aaKnown RBP6.59□□□□□ -1.35
HDAC3-211ENST00000491581 SLC16A13Q7RTY0 426 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 FAM24BQ8N5W8 94 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 OR1L8Q8NGR8 309 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 OR6F1Q8NGZ6 308 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 PINX1Q96BK5 328 aaKnown RBP6.59□□□□□ -1.35
HDAC3-211ENST00000491581 SEC22AQ96IW7 307 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 TP53RKQ96S44 253 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 C21orf62Q9NYP8 219 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 COMMD9Q9P000 198 aa6.59□□□□□ -1.35
HDAC3-211ENST00000491581 C15orf61A6NNL5 157 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 I3L2K1 104 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 DEFB4AO15263 64 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 NXPH3O95157 252 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 MT-CO2P00403 227 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 PPP5CP53041 499 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 ERVK-16P61578 105 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 TSPAN5P62079 268 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 WFDC3Q8IUB2 231 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 OR2C3Q8N628 320 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 OR52I2Q8NH67 350 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 IL17DQ8TAD2 202 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 VN1R17PQ8TDU5 208 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 LSM10Q969L4 123 aaKnown RBP6.58□□□□□ -1.36
HDAC3-211ENST00000491581 ABHD1Q96SE0 405 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 MIXL1Q9H2W2 232 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 TMEM14BQ9NUH8 114 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 PRR13Q9NZ81 148 aa6.58□□□□□ -1.36
HDAC3-211ENST00000491581 MRPL27Q9P0M9 148 aaKnown RBP6.58□□□□□ -1.36
HDAC3-211ENST00000491581 A0A087WXM4 84 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 FAM25AB3EWG3 89 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 FAM25CB3EWG5 89 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 FAM25GB3EWG6 89 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 SNAPC5O75971 98 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 YIF1AO95070 293 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 CD3DP04234 171 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 TAS2R46P59540 309 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 CTF1Q16619 201 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 Q6ZRM9 215 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 LYG2Q86SG7 212 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 C5orf66Q9H5L9 145 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 DAZ1Q9NQZ3 744 aaKnown RBP6.57□□□□□ -1.36
HDAC3-211ENST00000491581 SMPXQ9UHP9 88 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 UFC1Q9Y3C8 167 aa6.57□□□□□ -1.36
HDAC3-211ENST00000491581 A0A0B4J293 547 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 IGHV7-4-1A0A0J9YVY3 117 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 A0A1B0GU03 582 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 CXorf65A6NEN9 183 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 NDUFA4O00483 81 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 CHEK1O14757 476 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 TSPAN4O14817 238 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 NUPL2O15504 423 aaKnown RBP6.56□□□□□ -1.36
HDAC3-211ENST00000491581 ST8SIA3O43173 380 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 APOA1P02647 267 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 PGAM2P15259 253 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 ETV6P41212 452 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 GPR107Q5VW38 600 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 LEMD1Q68G75 181 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 H2BFWTQ7Z2G1 175 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 CMTM1Q8IZ96 169 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 RPP25LQ8N5L8 163 aaKnown RBP6.56□□□□□ -1.36
HDAC3-211ENST00000491581 LHFPL5Q8TAF8 219 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 CD300LFQ8TDQ1 290 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 ST8SIA2Q92186 375 aa6.56□□□□□ -1.36
HDAC3-211ENST00000491581 BSCL2Q96G97 398 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-211ENST00000491581 RHPN1-AS1Q9BWJ2 59 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms