RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 F11RQ9Y624 299 aaKnown RBP6.22□□□□□ -1.41
LSM2-213ENST00000491421 OR2T8A6NH00 312 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 FAM25AB3EWG3 89 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 FAM25CB3EWG5 89 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 FAM25GB3EWG6 89 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 M0QYG6 137 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 TGOLN2O43493 480 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 SCAF4O95104 1147 aaKnown RBP6.21□□□□□ -1.42
LSM2-213ENST00000491421 ANKRD55Q3KP44 614 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 RNASE12Q5GAN4 147 aaKnown RBP6.21□□□□□ -1.42
LSM2-213ENST00000491421 LINC00322Q6ZN03 302 aaPredicted RBP6.21□□□□□ -1.42
LSM2-213ENST00000491421 TBC1D26Q86UD7 250 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 SLC38A6Q8IZM9 456 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 OR52B4Q8NGK2 314 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 OR5B3Q8NH48 314 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 AP3S1Q92572 193 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 MARC2Q969Z3 335 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 BSCL2Q96G97 398 aaPredicted RBP6.21□□□□□ -1.42
LSM2-213ENST00000491421 TMEM56Q96MV1 263 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 HIPK2Q9H2X6 1198 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 FAM212BQ9NTI7 297 aaPredicted RBP6.21□□□□□ -1.42
LSM2-213ENST00000491421 TMEM14BQ9NUH8 114 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 FKBP11Q9NYL4 201 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 C21orf62Q9NYP8 219 aa6.21□□□□□ -1.42
LSM2-213ENST00000491421 STARD9Q9P2P6 4700 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 IGHV3-21A0A0B4J1V1 117 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 TRAV25A0A0B4J276 109 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 RBMY1BA6NDE4 496 aaKnown RBP6.2□□□□□ -1.42
LSM2-213ENST00000491421 RBMY1EA6NEQ0 496 aaKnown RBP6.2□□□□□ -1.42
LSM2-213ENST00000491421 DBX1A6NMT0 343 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 C15orf61A6NNL5 157 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 GABARAPO95166 117 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 RBMY1DP0C7P1 496 aaKnown RBP6.2□□□□□ -1.42
LSM2-213ENST00000491421 SMIM18P0DKX4 95 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 C8orf88P0DMB2 117 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 PGAM2P15259 253 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 MFAP2P55001 183 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 ELLP55199 621 aaPredicted RBP6.2□□□□□ -1.42
LSM2-213ENST00000491421 UCP3P55916 312 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 CTF1Q16619 201 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 Q56UQ5 140 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 RNASE10Q5GAN6 216 aaKnown RBP6.2□□□□□ -1.42
LSM2-213ENST00000491421 SPSB3Q6PJ21 355 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 RBPMS2Q6ZRY4 209 aaKnown RBP6.2□□□□□ -1.42
LSM2-213ENST00000491421 H2BFWTQ7Z2G1 175 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 UBAC2Q8NBM4 344 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 OR1L6Q8NGR2 347 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 OR4A16Q8NH70 328 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 TMEM190Q8WZ59 177 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 SEC22AQ96IW7 307 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 ATP6V0BQ99437 205 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 FAM110AQ9BQ89 295 aa6.2□□□□□ -1.42
LSM2-213ENST00000491421 ZNF436Q9C0F3 470 aaPredicted RBP6.2□□□□□ -1.42
LSM2-213ENST00000491421 NAA50Q9GZZ1 169 aaKnown RBP6.2□□□□□ -1.42
LSM2-213ENST00000491421 DAZ1Q9NQZ3 744 aaKnown RBP6.2□□□□□ -1.42
LSM2-213ENST00000491421 MRPL27Q9P0M9 148 aaKnown RBP6.2□□□□□ -1.42
LSM2-213ENST00000491421 K7EIM0 57 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 NDUFA4O00483 81 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 IGKV1-39P01597 117 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 IGKV1D-39P04432 117 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 ZNF182P17025 639 aaPredicted RBP6.19□□□□□ -1.42
LSM2-213ENST00000491421 TBPP20226 339 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 GPR107Q5VW38 600 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 CLRN3Q8NCR9 226 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 OR1P1Q8NH06 330 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 SCARB1Q8WTV0 552 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 MRGPRFQ96AM1 343 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 MISP3Q96FF7 219 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 CHRDL1Q9BU40 450 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 C20orf24Q9BUV8 137 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 EXTL2Q9UBQ6 330 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 KLK11Q9UBX7 282 aa6.19□□□□□ -1.42
LSM2-213ENST00000491421 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
LSM2-213ENST00000491421 LCE6AA0A183 80 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 PGPEP1LA6NFU8 196 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 F8W735 103 aaPredicted RBP6.18□□□□□ -1.42
LSM2-213ENST00000491421 CD3DP04234 171 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 PI3P19957 117 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 ADMP35318 185 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 PPP5CP53041 499 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 RND3P61587 244 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 PRCDQ00LT1 54 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 ARRDC1Q8N5I2 433 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 OR52I2Q8NH67 350 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 IL17DQ8TAD2 202 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 C15orf40Q8WUR7 153 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 ZNF486Q96H40 463 aaPredicted RBP6.18□□□□□ -1.42
LSM2-213ENST00000491421 SPAG8Q99932 426 aaPredicted RBP6.18□□□□□ -1.42
LSM2-213ENST00000491421 GGTLC1Q9BX51 225 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 C5orf66Q9H5L9 145 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 GAR1Q9NY12 217 aaKnown RBP6.18□□□□□ -1.42
LSM2-213ENST00000491421 PLA2G2EQ9NZK7 142 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 MTFP1Q9UDX5 166 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 TENM2Q9NT68 2774 aa6.18□□□□□ -1.42
LSM2-213ENST00000491421 CSMD3Q7Z407 3707 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 IGHV3OR16-8A0A075B7F1 116 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 LOC102724200A0A096LPH7 203 aaPredicted RBP6.17□□□□□ -1.42
LSM2-213ENST00000491421 FAM25EA8MYX2 175 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 TSPAN4O14817 238 aa6.17□□□□□ -1.42
LSM2-213ENST00000491421 NUPL2O15504 423 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms