RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 MED19A0JLT2 244 aaPredicted RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM30CPA0ZSE6 113 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ODAMA1E959 279 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 C20orf202A1L168 122 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF705FA8MVS1 300 aaPredicted RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 IQCF6A8MYZ5 107 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 C9JCJ5 164 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 C11orf94C9JXX5 98 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 J3QT63 122 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 CDIPTO14735 213 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 MLNRO43193 412 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 SPINT2O43291 252 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 TNFSF12O43508 249 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 OR2H2O95918 312 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 IGKV1-5P01602 117 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 MT-ND6P03923 174 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 OR5G3P0C626 314 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 OR10J4P0C629 311 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 LINC00614P0C842 121 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 P0C879 139 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF883P0CG24 379 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF705DP0CH99 300 aaPredicted RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF705BP0CI00 300 aaPredicted RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 CGB3P0DN86 165 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 CGB7P0DN87 165 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 CCL4P13236 92 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 MYOD1P15172 320 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 B4GALT1P15291 398 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 CRISP2P16562 243 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 KLK2P20151 261 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 CA6P23280 308 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 NPPCP23582 126 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ACP1P24666 158 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 GDF1P27539 372 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 EPHA8P29322 1005 aaPredicted RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 GCH1P30793 250 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 PRDX2P32119 198 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 BRS3P32247 399 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 MPV17P39210 176 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 KIR2DS2P43631 304 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 REG1BP48304 166 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 CDC34P49427 236 aaPredicted RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 SUB1P53999 127 aaKnown RBP eCLIP1.66□□□□□ -2.143e-10■■■□□ 14.8
SNRNP40-207ENST00000491106 FGF8P55075 233 aaPredicted RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 CLDN18P56856 261 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 SEC61BP60468 96 aaKnown RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 UBE2NP61088 152 aaKnown RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ERVS71-1P61550 626 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 PPP1CBP62140 327 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 RHOBP62745 196 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ERHP84090 104 aaKnown RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF90Q03938 601 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 SRYQ05066 204 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 EIF4EBP1Q13541 118 aaPredicted RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 TGIF1Q15583 401 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 OR1C1Q15619 314 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 TBC1D28Q2M2D7 210 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF876PQ49A33 203 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 MORN2Q502X0 79 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF766Q5HY98 468 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 OR10J3Q5JRS4 329 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ACTL10Q5JWF8 245 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 FFAR4Q5NUL3 377 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 DCAF10Q5QP82 559 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 CST9LP1Q5W188 147 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 LYSMD4Q5XG99 296 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 SPINK14Q6IE38 97 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 OR8G2PQ6IF36 304 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF705AQ6ZN79 300 aaPredicted RBP1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 C19orf35Q6ZS72 473 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM144Q7Z5S9 345 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 LINC01551Q86U37 167 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 NFE4Q86UQ8 179 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 TGIF2LXQ8IUE1 241 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 C11orf53Q8IXP5 236 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 UBALD2Q8IYN6 164 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ABHD12Q8N2K0 398 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 PNKDQ8N490 385 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 GBGT1Q8N5D6 347 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 KLHDC1Q8N7A1 406 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 SIGLECL1Q8N7X8 197 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF439Q8NDP4 499 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 OR5AU1Q8NGC0 362 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 OR2D3Q8NGH3 330 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 OR1K1Q8NGR3 316 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 OR1L1Q8NH94 360 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 SGMS2Q8NHU3 365 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 DTD1Q8TEA8 209 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 SFRP2Q96HF1 295 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 ADTRPQ96IZ2 230 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 FER1L6-AS2Q96M78 137 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 TAAR6Q96RI8 345 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 TBX15Q96SF7 602 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 RNF2Q99496 336 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 S1PR3Q99500 378 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 C20orf144Q9BQM9 153 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 RSG1Q9BU20 258 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 NPCDR1Q9BY65 106 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 CXXC4Q9H2H0 198 aa1.66□□□□□ -2.14
SNRNP40-207ENST00000491106 PARLQ9H300 379 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms