RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 WT1-ASQ06250 92 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 RNASE12Q5GAN4 147 aaKnown RBP4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 OR2B11Q5JQS5 317 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 RPL22L1Q6P5R6 122 aaKnown RBP4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 ZNF773Q6PK81 442 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 KCTD9Q7L273 389 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 LRRTM1Q86UE6 522 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 AQP12AQ8IXF9 295 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 UBAC2Q8NBM4 344 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 OR10W1Q8NGF6 305 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 OR4A4PQ8NGN8 299 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 GGHQ92820 318 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 MRPL48Q96GC5 212 aaKnown RBP4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 CIB1Q99828 191 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 UQCC2Q9BRT2 126 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 DCUN1D5Q9BTE7 237 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 GABARAPL3Q9BY60 117 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 GABARAPL1Q9H0R8 117 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 KCNK15Q9H427 330 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 PLEKHJ1Q9NW61 149 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 CKLFQ9UBR5 152 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 GHRLQ9UBU3 117 aa4.86□□□□□ -1.63
PDLIM1-203ENST00000490391 A0A1W2PPK0 400 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 H3BMM0 161 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 BET1O15155 118 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 SOCS1O15524 211 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 FABP7O15540 132 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 DIRAS3O95661 229 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 IGLV2-14P01704 120 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 LIMS3P0CW19 117 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 LIMS4P0CW20 117 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 MT1HL1P0DM35 61 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 HOXB6P17509 224 aaKnown RBP4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 RPL11P62913 178 aaKnown RBP4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 QRFPP83859 136 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 Q499Y3 187 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 CCDC58Q4VC31 144 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 Q56UQ5 140 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 TOMM20LQ6UXN7 152 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 STXBP6Q8NFX7 210 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 OR4S2Q8NH73 311 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 CCDC124Q96CT7 223 aaKnown RBP4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 SMIM19Q96E16 107 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 RNF125Q96EQ8 232 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 TMEM59Q9BXS4 323 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 NXF2Q9GZY0 626 aaKnown RBP4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 ZNF446Q9NWS9 450 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 BET1LQ9NYM9 111 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 TAGLN3Q9UI15 199 aa4.85□□□□□ -1.63
PDLIM1-203ENST00000490391 IGHV3OR16-12A0A075B7B8 117 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 TRAV3A0A0B4J244 114 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 LOC102723971A0A1B0GUV8 181 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 TMEM14DPA8MWL7 114 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 OGG1O15527 345 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 LALBAP00709 142 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 EIF4EP06730 217 aaKnown RBP4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 SERPINE2P07093 398 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 UBBP0CG47 229 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 CRHBPP24387 322 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 TMEM50BP56557 158 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 NUTF2P61970 127 aaKnown RBP4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 EIF4EBP1Q13541 118 aaPredicted RBP4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 TIMM50Q3ZCQ8 353 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 ANKRD39Q53RE8 183 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 YIF1BQ5BJH7 314 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 OGFRL1Q5TC84 451 aaPredicted RBP4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 SLC25A24Q6NUK1 477 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 FAM89BQ8N5H3 189 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 OR10J5Q8NHC4 309 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 TRUB1Q8WWH5 349 aaKnown RBP4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 UHRF2Q96PU4 802 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 GPHA2Q96T91 129 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 MYCBPQ99417 103 aaPredicted RBP4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 GINS3Q9BRX5 216 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 LPAR5Q9H1C0 372 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 HSF4Q9ULV5 492 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 MRPS7Q9Y2R9 242 aaKnown RBP4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 PRELID3BQ9Y3B1 194 aa4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 F11RQ9Y624 299 aaKnown RBP4.84□□□□□ -1.63
PDLIM1-203ENST00000490391 SAC3D1A6NKF1 404 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 F5H768 121 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 CYB5BO43169 146 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 DCTN3O75935 186 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 OR13C7P0DN81 318 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 GABRB1P18505 474 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 TAS2R43P59537 309 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 CLINT1Q14677 625 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 ESRGQ1W209 222 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 PSMG4Q5JS54 123 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 MEDAGQ5VYS4 303 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 H1FOOQ8IZA3 346 aaPredicted RBP4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 C1orf158Q8N1D5 194 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 NKAIN3Q8N8D7 197 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 ZNF709Q8N972 641 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 ARHGAP5-AS1Q96IT6 56 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 PGLYRP3Q96LB9 341 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 SLC29A1Q99808 456 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 QTRT1Q9BXR0 403 aaKnown RBP4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 MAGT1Q9H0U3 335 aa4.83□□□□□ -1.64
PDLIM1-203ENST00000490391 RBMX2Q9Y388 322 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms