RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 PRSS22Q9GZN4 317 aa2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 ZDHHC11Q9H8X9 412 aa2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 ZNF71Q9NQZ8 489 aaPredicted RBP2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 SLC39A9Q9NUM3 307 aa2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 ZNF586Q9NXT0 402 aa2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 IL36BQ9NZH7 164 aa2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 PEMTQ9UBM1 199 aa2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 HSPB7Q9UBY9 170 aa2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 CACNG5Q9UF02 275 aa2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 ST3GAL6Q9Y274 331 aa2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 LAMTOR2Q9Y2Q5 125 aa2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 CHTOPQ9Y3Y2 248 aaKnown RBP2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 ARL2-SNX15V9GYD0 113 aa2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 ASPMQ8IZT6 3477 aa2.84□□□□□ -1.95
CRNKL1-203ENST00000490258 ZFHX2Q9C0A1 2572 aaPredicted RBP2.84□□□□□ -1.96
CRNKL1-203ENST00000490258 DNAJC13O75165 2243 aa2.84□□□□□ -1.96
CRNKL1-203ENST00000490258 FAM186AA6NE01 2351 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 EP300Q09472 2414 aaPredicted RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 CHD3Q12873 2000 aaKnown RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 PRR14LQ5THK1 2151 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 TRAV30A0A087WSZ9 112 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 UBE2L5PA0A1B0GUS4 154 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 C11orf94C9JXX5 98 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 F5H5K5 113 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 H3BP45 60 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 RBFOX2O43251 390 aaKnown RBP eCLIP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 WDR1O75083 606 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 SS18L1O75177 396 aaPredicted RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 VAMP5O95183 116 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 SERPINE2P07093 398 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 GPX1P07203 203 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 SCTP09683 121 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 COX5AP20674 150 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 CBLN1P23435 193 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 TSPOP30536 169 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 CEACAM8P31997 349 aaPredicted RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 CAMPP49913 170 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 DUSP3P51452 185 aaPredicted RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 CCL11P51671 97 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 HNRNPA3P51991 378 aaKnown RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 PRRX1P54821 245 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 KRTAP10-5P60370 271 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 FGF12P61328 243 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 ARF6P62330 175 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 ARG2P78540 354 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 PSG4Q00888 419 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 SRSF1Q07955 248 aaKnown RBP eCLIP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 EIF4EBP1Q13541 118 aaPredicted RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 LY6DQ14210 128 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 ZNF718Q3SXZ3 478 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 ZNF585BQ52M93 769 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 PHYHD1Q5SRE7 291 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 C9orf135Q5VTT2 229 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 CARD17Q5XLA6 110 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 SPINK14Q6IE38 97 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 C19orf35Q6ZS72 473 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 MOB1BQ7L9L4 216 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 SMIM15Q7Z3B0 74 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 NIT1Q86X76 327 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 KMT5CQ86Y97 462 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 MUC15Q8N387 334 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 KLHDC1Q8N7A1 406 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 TCTEX1D1Q8N7M0 179 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 ZNF114Q8NC26 417 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 ZNF738Q8NE65 137 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 FDCSPQ8NFU4 85 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 OR2M7Q8NG81 312 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 OR10V1Q8NGI7 309 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 OR10G9Q8NGN4 311 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 OR10G7Q8NGN6 311 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 OR1F12Q8NHA8 337 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 SGMS2Q8NHU3 365 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 BCL2L2Q92843 193 aaPredicted RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 APOBEC3DQ96AK3 386 aaPredicted RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 CIB3Q96Q77 187 aaPredicted RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 TMEM204Q9BSN7 226 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 SF3B5Q9BWJ5 86 aaKnown RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 RBM24Q9BX46 236 aaKnown RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 FGF23Q9GZV9 251 aaPredicted RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 ZNF442Q9H7R0 627 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 SLC25A22Q9H936 323 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 GNB4Q9HAV0 340 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 PROK2Q9HC23 129 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 HES4Q9HCC6 221 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 CCL28Q9NRJ3 127 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 PSENENQ9NZ42 101 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 KLRF1Q9NZS2 232 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 ZNF580Q9UK33 172 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 WDR83OSQ9Y284 106 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 PAM16Q9Y3D7 125 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 OR2W1Q9Y3N9 320 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 PTPRZ1P23471 2315 aaPredicted RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 ZNF462Q96JM2 2506 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 USP9XQ93008 2570 aaPredicted RBP2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 ZGRF1Q86YA3 2104 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 SVILO95425 2214 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 KNTC1P50748 2209 aa2.83□□□□□ -1.96
CRNKL1-203ENST00000490258 CNOT1A5YKK6 2376 aaKnown RBP2.82□□□□□ -1.96
CRNKL1-203ENST00000490258 USP24Q9UPU5 2620 aa2.82□□□□□ -1.96
CRNKL1-203ENST00000490258 TRGV10A0A0A0MS01 117 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms