RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 C19orf73Q9NVV2 129 aa14.94□□□□□ -0.02
SMC4-222ENST00000490207 TECRQ9NZ01 308 aaKnown RBP14.94□□□□□ -0.02
SMC4-222ENST00000490207 IGHV3-21A0A0B4J1V1 117 aa14.93□□□□□ -0.02
SMC4-222ENST00000490207 C3orf85A0A1B0GTC6 90 aa14.93□□□□□ -0.02
SMC4-222ENST00000490207 CTDSPLO15194 276 aa14.93□□□□□ -0.02
SMC4-222ENST00000490207 AKR1C2P52895 323 aa14.93□□□□□ -0.02
SMC4-222ENST00000490207 OR1L6Q8NGR2 347 aa14.93□□□□□ -0.02
SMC4-222ENST00000490207 MARCH1Q8TCQ1 289 aa14.93□□□□□ -0.02
SMC4-222ENST00000490207 RCHY1Q96PM5 261 aa14.93□□□□□ -0.02
SMC4-222ENST00000490207 ZMAT4Q9H898 229 aa14.93□□□□□ -0.02
SMC4-222ENST00000490207 CTSDP07339 412 aaPredicted RBP14.92□□□□□ -0.02
SMC4-222ENST00000490207 CD81P60033 236 aa14.92□□□□□ -0.02
SMC4-222ENST00000490207 PRCDQ00LT1 54 aa14.92□□□□□ -0.02
SMC4-222ENST00000490207 UNQ9165/PRO28630Q6UXU0 137 aa14.92□□□□□ -0.02
SMC4-222ENST00000490207 SLIRPQ9GZT3 109 aaKnown RBP14.92□□□□□ -0.02
SMC4-222ENST00000490207 PALMDQ9NP74 551 aa14.92□□□□□ -0.02
SMC4-222ENST00000490207 IGHV3-35A0A0C4DH35 117 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 OR2T8A6NH00 312 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 DISC1C4P0D8 188 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 ATG12O94817 140 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 IGKV1-5P01602 117 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 AKAIN1P0CW23 69 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 CBLN1P23435 193 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 GUCA2BQ16661 112 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 IZUMO4Q1ZYL8 232 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 TRIM16LQ309B1 348 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 OR2C3Q8N628 320 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 OR4C16Q8NGL9 310 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 OR1P1Q8NH06 330 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 BSCL2Q96G97 398 aaPredicted RBP14.91□□□□□ -0.02
SMC4-222ENST00000490207 PLEKHA3Q9HB20 300 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 SLC2A8Q9NY64 477 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 C21orf62Q9NYP8 219 aa14.91□□□□□ -0.02
SMC4-222ENST00000490207 C14orf166Q9Y224 244 aaKnown RBP14.91□□□□□ -0.02
SMC4-222ENST00000490207 ZNF785A8K8V0 405 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 K7EIM0 57 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 HSPE1P61604 102 aaKnown RBP14.9□□□□□ -0.02
SMC4-222ENST00000490207 TM4SF20Q53R12 229 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 UBAC2Q8NBM4 344 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 UXS1Q8NBZ7 420 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 ZNF114Q8NC26 417 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 SCARB1Q8WTV0 552 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 TMEM190Q8WZ59 177 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 ATP6V0BQ99437 205 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 NEURL2Q9BR09 285 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 TM2D3Q9BRN9 247 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 ZNF436Q9C0F3 470 aaPredicted RBP14.9□□□□□ -0.02
SMC4-222ENST00000490207 TUBA4BQ9H853 241 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 MLXQ9UH92 298 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 UFC1Q9Y3C8 167 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 SELENOKQ9Y6D0 94 aa14.9□□□□□ -0.02
SMC4-222ENST00000490207 DNAH7Q8WXX0 4024 aa14.89□□□□□ -0.03
SMC4-222ENST00000490207 B3GALNT1O75752 331 aa14.89□□□□□ -0.03
SMC4-222ENST00000490207 P0C879 139 aa14.89□□□□□ -0.03
SMC4-222ENST00000490207 UCP1P25874 307 aa14.89□□□□□ -0.03
SMC4-222ENST00000490207 ELLP55199 621 aaPredicted RBP14.89□□□□□ -0.03
SMC4-222ENST00000490207 SP6Q3SY56 376 aa14.89□□□□□ -0.03
SMC4-222ENST00000490207 Q56UQ5 140 aa14.89□□□□□ -0.03
SMC4-222ENST00000490207 ZNF57Q68EA5 555 aaPredicted RBP14.89□□□□□ -0.03
SMC4-222ENST00000490207 SPSB3Q6PJ21 355 aa14.89□□□□□ -0.03
SMC4-222ENST00000490207 BTNL8Q6UX41 500 aa14.89□□□□□ -0.03
SMC4-222ENST00000490207 MCFD2Q8NI22 146 aa14.89□□□□□ -0.03
SMC4-222ENST00000490207 RNASE11Q8TAA1 199 aaKnown RBP14.89□□□□□ -0.03
SMC4-222ENST00000490207 WDR89Q96FK6 387 aaPredicted RBP14.89□□□□□ -0.03
SMC4-222ENST00000490207 RSL24D1Q9UHA3 163 aaKnown RBP14.89□□□□□ -0.03
SMC4-222ENST00000490207 F8W735 103 aaPredicted RBP14.88□□□□□ -0.03
SMC4-222ENST00000490207 GSTZ1O43708 216 aaPredicted RBP14.88□□□□□ -0.03
SMC4-222ENST00000490207 CD7P09564 240 aa14.88□□□□□ -0.03
SMC4-222ENST00000490207 SURF2Q15527 256 aaPredicted RBP14.88□□□□□ -0.03
SMC4-222ENST00000490207 SPINK9Q5DT21 86 aa14.88□□□□□ -0.03
SMC4-222ENST00000490207 TMEM61Q8N0U2 210 aa14.88□□□□□ -0.03
SMC4-222ENST00000490207 SLC35G3Q8N808 338 aa14.88□□□□□ -0.03
SMC4-222ENST00000490207 MARC2Q969Z3 335 aa14.88□□□□□ -0.03
SMC4-222ENST00000490207 MISP3Q96FF7 219 aa14.88□□□□□ -0.03
SMC4-222ENST00000490207 PRRT1Q99946 306 aa14.88□□□□□ -0.03
SMC4-222ENST00000490207 NXF2Q9GZY0 626 aaKnown RBP14.88□□□□□ -0.03
SMC4-222ENST00000490207 CEPT1Q9Y6K0 416 aa14.88□□□□□ -0.03
SMC4-222ENST00000490207 STAB2Q8WWQ8 2551 aa14.88□□□□□ -0.03
SMC4-222ENST00000490207 TENM3Q9P273 2699 aa14.87□□□□□ -0.03
SMC4-222ENST00000490207 ANKRD20A5PA0PJZ0 165 aa14.87□□□□□ -0.03
SMC4-222ENST00000490207 OR5AC1P0C628 307 aa14.87□□□□□ -0.03
SMC4-222ENST00000490207 ERHP84090 104 aaKnown RBP14.87□□□□□ -0.03
SMC4-222ENST00000490207 RRNAD1Q96FB5 475 aaKnown RBP14.87□□□□□ -0.03
SMC4-222ENST00000490207 CHRDL1Q9BU40 450 aa14.87□□□□□ -0.03
SMC4-222ENST00000490207 PDCD10Q9BUL8 212 aa14.87□□□□□ -0.03
SMC4-222ENST00000490207 NAA60Q9H7X0 242 aa14.87□□□□□ -0.03
SMC4-222ENST00000490207 MRPL27Q9P0M9 148 aaKnown RBP14.87□□□□□ -0.03
SMC4-222ENST00000490207 A0A0B4J293 547 aa14.86□□□□□ -0.03
SMC4-222ENST00000490207 CCDC160A6NGH7 325 aa14.86□□□□□ -0.03
SMC4-222ENST00000490207 I3L2K1 104 aa14.86□□□□□ -0.03
SMC4-222ENST00000490207 NDUFA4O00483 81 aa14.86□□□□□ -0.03
SMC4-222ENST00000490207 ST8SIA3O43173 380 aa14.86□□□□□ -0.03
SMC4-222ENST00000490207 C8orf88P0DMB2 117 aa14.86□□□□□ -0.03
SMC4-222ENST00000490207 TNFSF8P32971 234 aa14.86□□□□□ -0.03
SMC4-222ENST00000490207 OR51S1Q8NGJ8 323 aa14.86□□□□□ -0.03
SMC4-222ENST00000490207 RTBDNQ9BSG5 229 aaPredicted RBP14.86□□□□□ -0.03
SMC4-222ENST00000490207 TMEM222Q9H0R3 208 aa14.86□□□□□ -0.03
SMC4-222ENST00000490207 WFDC10AQ9H1F0 79 aa14.86□□□□□ -0.03
SMC4-222ENST00000490207 C5orf66Q9H5L9 145 aa14.86□□□□□ -0.03
SMC4-222ENST00000490207 GAR1Q9NY12 217 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms