RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 CASQ2O14958 399 aaPredicted RBP10.14□□□□□ -0.79
VARS-227ENST00000489979 FGF2P09038 288 aa10.14□□□□□ -0.79
VARS-227ENST00000489979 RBMY1A1P0DJD3 496 aaKnown RBP10.14□□□□□ -0.79
VARS-227ENST00000489979 RBMY1CP0DJD4 496 aa10.14□□□□□ -0.79
VARS-227ENST00000489979 ARPC4P59998 168 aa10.14□□□□□ -0.79
VARS-227ENST00000489979 PAFAH1B2P68402 229 aa10.14□□□□□ -0.79
VARS-227ENST00000489979 RELQ04864 619 aaPredicted RBP10.14□□□□□ -0.79
VARS-227ENST00000489979 RBMY1FQ15415 496 aaKnown RBP10.14□□□□□ -0.79
VARS-227ENST00000489979 LEMD1Q68G75 181 aa10.14□□□□□ -0.79
VARS-227ENST00000489979 Q6ZTC4 211 aa10.14□□□□□ -0.79
VARS-227ENST00000489979 OR51H1Q8NH63 302 aa10.14□□□□□ -0.79
VARS-227ENST00000489979 OR10C1Q96KK4 312 aa10.14□□□□□ -0.79
VARS-227ENST00000489979 SLC5A7Q9GZV3 580 aa10.14□□□□□ -0.79
VARS-227ENST00000489979 VCX3BQ9H321 246 aa10.14□□□□□ -0.79
VARS-227ENST00000489979 PLEKHA2Q9HB19 425 aa10.14□□□□□ -0.79
VARS-227ENST00000489979 NDUFA4L2Q9NRX3 87 aa10.14□□□□□ -0.79
VARS-227ENST00000489979 TRAV14DV4A0A0A6YYC5 116 aa10.13□□□□□ -0.79
VARS-227ENST00000489979 TRAV10A0A0B4J240 114 aa10.13□□□□□ -0.79
VARS-227ENST00000489979 IGHV4-28A0A0C4DH34 117 aa10.13□□□□□ -0.79
VARS-227ENST00000489979 RTL8CO15255 209 aa10.13□□□□□ -0.79
VARS-227ENST00000489979 NUPL2O15504 423 aaKnown RBP10.13□□□□□ -0.79
VARS-227ENST00000489979 PPYP01298 95 aa10.13□□□□□ -0.79
VARS-227ENST00000489979 FXYD4P59646 89 aa10.13□□□□□ -0.79
VARS-227ENST00000489979 DEFB131AP59861 70 aa10.13□□□□□ -0.79
VARS-227ENST00000489979 TCF24Q7RTU0 167 aa10.13□□□□□ -0.79
VARS-227ENST00000489979 PRSS48Q7RTY5 328 aa10.13□□□□□ -0.79
VARS-227ENST00000489979 LSM10Q969L4 123 aaKnown RBP10.13□□□□□ -0.79
VARS-227ENST00000489979 KRTAP4-5Q9BYR2 181 aa10.13□□□□□ -0.79
VARS-227ENST00000489979 COMMD9Q9P000 198 aa10.13□□□□□ -0.79
VARS-227ENST00000489979 ERVK-16P61578 105 aa10.12□□□□□ -0.79
VARS-227ENST00000489979 AADACL3Q5VUY0 350 aa10.12□□□□□ -0.79
VARS-227ENST00000489979 PVRIGQ6DKI7 326 aa10.12□□□□□ -0.79
VARS-227ENST00000489979 ZNF818PQ6ZRF7 136 aa10.12□□□□□ -0.79
VARS-227ENST00000489979 STHQ8IWL8 128 aa10.12□□□□□ -0.79
VARS-227ENST00000489979 BEST4Q8NFU0 473 aa10.12□□□□□ -0.79
VARS-227ENST00000489979 DGCR14Q96DF8 476 aaKnown RBP10.12□□□□□ -0.79
VARS-227ENST00000489979 RNF126Q9BV68 326 aa10.12□□□□□ -0.79
VARS-227ENST00000489979 MS4A6AQ9H2W1 248 aa10.12□□□□□ -0.79
VARS-227ENST00000489979 NSG2Q9Y328 171 aa10.12□□□□□ -0.79
VARS-227ENST00000489979 OR51B2Q9Y5P1 312 aa10.12□□□□□ -0.79
VARS-227ENST00000489979 TRDV1A0A1B0GX56 115 aa10.11□□□□□ -0.79
VARS-227ENST00000489979 M0R2N4 97 aa10.11□□□□□ -0.79
VARS-227ENST00000489979 DNASE2O00115 360 aaPredicted RBP10.11□□□□□ -0.79
VARS-227ENST00000489979 SCGNO76038 276 aa10.11□□□□□ -0.79
VARS-227ENST00000489979 DFFBO76075 338 aa10.11□□□□□ -0.79
VARS-227ENST00000489979 GIG44P09565 113 aaPredicted RBP10.11□□□□□ -0.79
VARS-227ENST00000489979 C22orf42Q6IC83 251 aa10.11□□□□□ -0.79
VARS-227ENST00000489979 CENPSQ8N2Z9 138 aa10.11□□□□□ -0.79
VARS-227ENST00000489979 LILRB2Q8N423 598 aa10.11□□□□□ -0.79
VARS-227ENST00000489979 FAM24BQ8N5W8 94 aa10.11□□□□□ -0.79
VARS-227ENST00000489979 POM121L12Q8N7R1 296 aa10.11□□□□□ -0.79
VARS-227ENST00000489979 GIMAP1Q8WWP7 306 aa10.11□□□□□ -0.79
VARS-227ENST00000489979 ST8SIA2Q92186 375 aa10.11□□□□□ -0.79
VARS-227ENST00000489979 SLC25A46Q96AG3 418 aa10.11□□□□□ -0.79
VARS-227ENST00000489979 NXF2Q9GZY0 626 aaKnown RBP10.11□□□□□ -0.79
VARS-227ENST00000489979 ELOA3CA0A087WX78 387 aaPredicted RBP10.1□□□□□ -0.79
VARS-227ENST00000489979 MARCH11A6NNE9 402 aa10.1□□□□□ -0.79
VARS-227ENST00000489979 NOTOA8MTQ0 251 aa10.1□□□□□ -0.79
VARS-227ENST00000489979 ST8SIA3O43173 380 aa10.1□□□□□ -0.79
VARS-227ENST00000489979 APOHP02749 345 aaPredicted RBP10.1□□□□□ -0.79
VARS-227ENST00000489979 EIF4EP06730 217 aaKnown RBP10.1□□□□□ -0.79
VARS-227ENST00000489979 FCER2P06734 321 aa10.1□□□□□ -0.79
VARS-227ENST00000489979 MIFP14174 115 aa10.1□□□□□ -0.79
VARS-227ENST00000489979 MFAP4P55083 255 aa10.1□□□□□ -0.79
VARS-227ENST00000489979 ZNF367Q7RTV3 350 aa10.1□□□□□ -0.79
VARS-227ENST00000489979 TMEM17Q86X19 198 aa10.1□□□□□ -0.79
VARS-227ENST00000489979 HOGA1Q86XE5 327 aa10.1□□□□□ -0.79
VARS-227ENST00000489979 MISP3Q96FF7 219 aa10.1□□□□□ -0.79
VARS-227ENST00000489979 NDUFB11Q9NX14 153 aa10.1□□□□□ -0.79
VARS-227ENST00000489979 IGHV3-66A0A0C4DH42 116 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 ZNF705EA8MWA4 302 aaPredicted RBP10.09□□□□□ -0.79
VARS-227ENST00000489979 I3L2K1 104 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 SNAPC5O75971 98 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 KRASP01116 189 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 IGHV3-48P01763 117 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 CD5P06127 495 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 RPL11P62913 178 aaKnown RBP10.09□□□□□ -0.79
VARS-227ENST00000489979 TBCEQ15813 527 aaPredicted RBP10.09□□□□□ -0.79
VARS-227ENST00000489979 ZNF767PQ75MW2 155 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 OR1P1Q8NH06 330 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 LGALS14Q8TCE9 139 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 TMEM56Q96MV1 263 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 TXN2Q99757 166 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 VSIRQ9H7M9 311 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 DAPK2Q9UIK4 370 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 X6R8D5 127 aa10.09□□□□□ -0.79
VARS-227ENST00000489979 LRP1BQ9NZR2 4599 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 TRAV18A0A075B6X5 111 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 DEFB131BA0A096LNP1 70 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 DBX1A6NMT0 343 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 AMBPP02760 352 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 P0DMU3 169 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 FAM231AP0DMU4 169 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 FAM231CP0DMU5 169 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 C4BPBP20851 252 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 F2RP25116 425 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 GNRHRP30968 328 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 G6PCP35575 357 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 LPAR6P43657 344 aa10.08□□□□□ -0.8
VARS-227ENST00000489979 TMEM41BQ5BJD5 291 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms