RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 F5H768 121 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 PSMD12O00232 456 aaPredicted RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 NDUFA2O43678 99 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 CREBL2O60519 120 aaPredicted RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 HPGDSO60760 199 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 NOS1APO75052 506 aaPredicted RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 SMIM24O75264 130 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 CNIH1O95406 144 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 KRT75O95678 551 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 IFNA21P01568 189 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 TCRBP04435 133 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 CALB1P05937 261 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 UCHL3P15374 230 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 UGT2B7P16662 529 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 AP2S1P53680 142 aaPredicted RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 OR4D2P58180 307 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 RANP62826 216 aaKnown RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 CCL7P80098 99 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 RPL19P84098 196 aaKnown RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 AESQ08117 197 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 MLLT11Q13015 90 aaPredicted RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 SRSF6Q13247 344 aaKnown RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 KRR1Q13601 381 aaKnown RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 NDUFA5Q16718 116 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 BRMS1LQ5PSV4 323 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 TRIQKQ629K1 86 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 DNM1P34Q6PK57 102 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 TMED4Q7Z7H5 227 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 LYG2Q86SG7 212 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 RPS19BP1Q86WX3 136 aaKnown RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 RPP25LQ8N5L8 163 aaKnown RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 C12orf29Q8N999 325 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM35BQ8NCS4 154 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 PXT1Q8NFP0 134 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 MAFIPQ8WZ33 124 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 BORCS5Q969J3 196 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 KCTD7Q96MP8 289 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 PRAP1Q96NZ9 151 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 TSC22D3Q99576 134 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 PHB2Q99623 299 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 NIPSNAP1Q9BPW8 284 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 HOPXQ9BPY8 73 aaPredicted RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 TIPINQ9BVW5 301 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 PCBD2Q9H0N5 130 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 MS4A6AQ9H2W1 248 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 XPNPEP1Q9NQW7 623 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 ARL5AQ9Y689 179 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 NUP155O75694 1391 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 EIF3AQ14152 1382 aaKnown RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 MAP3K5Q99683 1374 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 NUP160Q12769 1436 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 C9orf84Q5VXU9 1444 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 TINCRA0A1B0GVN0 87 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 MIF4GDA9UHW6 222 aaKnown RBP0.64□□□□□ -2.31
CCDC39-206ENST00000489868 DISC1C4P0D8 188 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 TSTD3H0UI37 97 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 M0QZK8 103 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 KCNK1O00180 336 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 CXCR6O00574 342 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 COX7A2LO14548 114 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 PFDN6O15212 129 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 BIRC5O15392 142 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 ARPC5O15511 151 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 SSNA1O43805 119 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 FADS1O60427 444 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 CRYZL1O95825 349 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 TYMSP04818 313 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 IFNA16P05015 189 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 ISG15P05161 165 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 NBEAP1P0C6P0 100 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 FAM228BP0C875 321 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 TRGC1P0CF51 173 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 C8orf88P0DMB2 117 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 KCNE1P15382 129 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 HIST1H1CP16403 213 aaKnown RBP0.64□□□□□ -2.31
CCDC39-206ENST00000489868 RPS12P25398 132 aaKnown RBP0.64□□□□□ -2.31
CCDC39-206ENST00000489868 SLCO1A2P46721 670 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 RPL5P46777 297 aaKnown RBP0.64□□□□□ -2.31
CCDC39-206ENST00000489868 TCL1AP56279 114 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 AP1S1P61966 158 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 PSPHP78330 225 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 TFAMQ00059 246 aaKnown RBP0.64□□□□□ -2.31
CCDC39-206ENST00000489868 POU6F1Q14863 301 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 PLPPR5Q32ZL2 321 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 FAM27BQ5VT28 67 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 SYPL2Q5VXT5 272 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 CST9Q5W186 159 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 DHRS4L2Q6PKH6 230 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 CD200R1LQ6Q8B3 271 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 DHFR2Q86XF0 187 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 OR6V1Q8N148 313 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 UBL4BQ8N7F7 174 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM161BQ8NDZ6 487 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 OR1M1Q8NGA1 313 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 OR51D1Q8NGF3 324 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 OR13D1Q8NGV5 346 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 OR10X1Q8NGY0 326 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 OR10J5Q8NHC4 309 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 RAB8BQ92930 207 aa0.64□□□□□ -2.31
CCDC39-206ENST00000489868 TESCQ96BS2 214 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms