RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 CBLN1P23435 193 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 RORCP51449 518 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 FXYD4P59646 89 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 TSPAN5P62079 268 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 SSBP2P81877 361 aaPredicted RBP5.32□□□□□ -1.56
COL9A1-209ENST00000489861 POU2AF1Q16633 256 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 OR2B11Q5JQS5 317 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 SOHLH1Q5JUK2 328 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 C1orf134Q5TEV5 83 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 SERTAD4-AS1Q5TG53 156 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 DHRS11Q6UWP2 260 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 CLEC19AQ6UXS0 136 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 Q6ZRM9 215 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 SAMD12Q8N8I0 201 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 VN1R17PQ8TDU5 208 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 SLC25A46Q96AG3 418 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 SLC25A38Q96DW6 304 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 ZNF503Q96F45 646 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 C5orf30Q96GV9 206 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 CCDC140Q96MF4 163 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 TMEM56Q96MV1 263 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 CCL28Q9NRJ3 127 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 ELF5Q9UKW6 265 aaPredicted RBP5.32□□□□□ -1.56
COL9A1-209ENST00000489861 IGKV1D-13A0A0B4J2D9 117 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 KIR2DL5BA0A0G2JN68 375 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 KIR2DL5BA0A0G2JPC4 375 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 A6NHS1 94 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 GPR31O00270 319 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 DEFB4AO15263 64 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 TNFSF12O43508 249 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 IGLV2-14P01704 120 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 CLEC2LP0C7M8 214 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 TRAPPC2P0DI81 140 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 TRAPPC2BP0DI82 140 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 IGKV1-13P0DP09 117 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 F2RP25116 425 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 FCGR2BP31994 310 aaPredicted RBP5.31□□□□□ -1.56
COL9A1-209ENST00000489861 RCVRNP35243 200 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 TAS2R20P59543 309 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 RPL30P62888 115 aaKnown RBP5.31□□□□□ -1.56
COL9A1-209ENST00000489861 RELQ04864 619 aaPredicted RBP5.31□□□□□ -1.56
COL9A1-209ENST00000489861 EIF4EBP1Q13541 118 aaPredicted RBP5.31□□□□□ -1.56
COL9A1-209ENST00000489861 KLK9Q2XQG4 91 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 XP32Q5T750 250 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 SSX9Q7RTT3 188 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 KIR2DL5AQ8N109 375 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 CENPSQ8N2Z9 138 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 OR2C3Q8N628 320 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 STPG3Q8N7X2 389 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 UXS1Q8NBZ7 420 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 OR1L8Q8NGR8 309 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 OR5H6Q8NGV6 325 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 KIR2DL5BQ8NHK3 375 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 MOB3AQ96BX8 217 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 YIPF6Q96EC8 236 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 BSCL2Q96G97 398 aaPredicted RBP5.31□□□□□ -1.56
COL9A1-209ENST00000489861 ZNF2Q9BSG1 426 aaPredicted RBP5.31□□□□□ -1.56
COL9A1-209ENST00000489861 QTRT1Q9BXR0 403 aaKnown RBP5.31□□□□□ -1.56
COL9A1-209ENST00000489861 C5orf66Q9H5L9 145 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 DAZ1Q9NQZ3 744 aaKnown RBP5.31□□□□□ -1.56
COL9A1-209ENST00000489861 MDFICQ9P1T7 246 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 RABL2AQ9UBK7 228 aaPredicted RBP5.31□□□□□ -1.56
COL9A1-209ENST00000489861 KLK9Q9UKQ9 250 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 PRNDQ9UKY0 176 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 RABL2BQ9UNT1 228 aa5.31□□□□□ -1.56
COL9A1-209ENST00000489861 IGLV11-55A0A075B6I3 123 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 HMX3A6NHT5 357 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 MARCH11A6NNE9 402 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 TEX22C9J3V5 150 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 PPP5D1E7EU14 171 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 NDUFA4O00483 81 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 UPK2O00526 184 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 NUPL2O15504 423 aaKnown RBP5.3□□□□□ -1.56
COL9A1-209ENST00000489861 TGOLN2O43493 480 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 B3GALNT1O75752 331 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 OR2C1O95371 312 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 PRH1P02810 166 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 P0DMU3 169 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 FAM231AP0DMU4 169 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 FAM231CP0DMU5 169 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 RPA2P15927 270 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 NAT1P18440 290 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 TBPP20226 339 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 PTBP1P26599 531 aaKnown RBP eCLIP5.3□□□□□ -1.56
COL9A1-209ENST00000489861 RPS19P39019 145 aaKnown RBP5.3□□□□□ -1.56
COL9A1-209ENST00000489861 PAFAH1B2P68402 229 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 DEFA5Q01523 94 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 PVRIGQ6DKI7 326 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 BTNL8Q6UX41 500 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 SPATA12Q7Z6I5 190 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 TMEM61Q8N0U2 210 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 VKORC1L1Q8N0U8 176 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 LYPD1Q8N2G4 141 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 GDPD1Q8N9F7 314 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 OR5B3Q8NH48 314 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 OR51H1Q8NH63 302 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 LSM10Q969L4 123 aaKnown RBP5.3□□□□□ -1.56
COL9A1-209ENST00000489861 DGCR14Q96DF8 476 aaKnown RBP5.3□□□□□ -1.56
COL9A1-209ENST00000489861 GALNT14Q96FL9 552 aa5.3□□□□□ -1.56
COL9A1-209ENST00000489861 ZNF486Q96H40 463 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms