RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 ARL14EPLP0DKL9 152 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 CCL3L1P16619 93 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 CHRNB4P30926 498 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 SUB1P53999 127 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL9A1-208ENST00000489611 CST9LP1Q5W188 147 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 ZCCHC24Q8N2G6 241 aaKnown RBP12.17□□□□□ -0.46
COL9A1-208ENST00000489611 ST6GALNAC6Q969X2 333 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 IMMP2LQ96T52 175 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 SRD5A3Q9H8P0 318 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 PATZ1Q9HBE1 687 aaKnown RBP12.17□□□□□ -0.46
COL9A1-208ENST00000489611 NDUFA4L2Q9NRX3 87 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 ACACBO00763 2458 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 RBP4P02753 201 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
COL9A1-208ENST00000489611 LOXP28300 417 aaPredicted RBP12.17□□□□□ -0.46
COL9A1-208ENST00000489611 CDX1P47902 265 aaPredicted RBP12.17□□□□□ -0.46
COL9A1-208ENST00000489611 LGALS7P47929 136 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 HLA-DRB5Q30154 266 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 GCSAMLQ5JQS6 135 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 KCNIP4Q6PIL6 250 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 OR51G1Q8NGK1 321 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 C1orf159Q96HA4 380 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 RNF2Q99496 336 aa12.17□□□□□ -0.46
COL9A1-208ENST00000489611 DLX6P56179 175 aa12.16□□□□□ -0.46
COL9A1-208ENST00000489611 C16orf82Q7Z2V1 217 aa12.16□□□□□ -0.46
COL9A1-208ENST00000489611 RNASEH2CQ8TDP1 164 aaKnown RBP12.16□□□□□ -0.46
COL9A1-208ENST00000489611 ABHD5Q8WTS1 349 aa12.16□□□□□ -0.46
COL9A1-208ENST00000489611 GATAD1Q8WUU5 269 aa12.16□□□□□ -0.46
COL9A1-208ENST00000489611 NABP2Q9BQ15 211 aa12.16□□□□□ -0.46
COL9A1-208ENST00000489611 TMEM167BQ9NRX6 74 aa12.16□□□□□ -0.46
COL9A1-208ENST00000489611 SLC45A2Q9UMX9 530 aa12.16□□□□□ -0.46
COL9A1-208ENST00000489611 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-208ENST00000489611 IGHV1-8P0DP01 117 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 RNASE2P10153 161 aaKnown RBP12.15□□□□□ -0.46
COL9A1-208ENST00000489611 AREGP15514 252 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 GCHFRP30047 84 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 GALR1P47211 349 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 TAS2R45P59539 299 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 LCN2P80188 198 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 VMA21Q3ZAQ7 101 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 TGIF2LXQ8IUE1 241 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 SSMEM1Q8WWF3 244 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 UHRF2Q96PU4 802 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 CTSZQ9UBR2 303 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 POLEQ07864 2286 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 FAM90A27PA6NNH2 459 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 PPP5D1E7EU14 171 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 HIST1H2BKO60814 126 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 TRGC2P03986 189 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 HIST1H2BJP06899 126 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 HIST1H2BOP23527 126 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 HIST1H2BBP33778 126 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 PRRX1P54821 245 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 FAM3BP58499 235 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-208ENST00000489611 HIST1H2BDP58876 126 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 HIST1H2BCP62807 126 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 ADORA2A-AS1P86434 159 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 CD69Q07108 199 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 HIST2H2BEQ16778 126 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.15□□□□□ -0.46
COL9A1-208ENST00000489611 LYPD2Q6UXB3 125 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 PQLC2Q6ZP29 291 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 HIST1H2BHQ93079 126 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 HIST1H2BNQ99877 126 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 HIST1H2BMQ99879 126 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 TMEM133Q9H2Q1 129 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 RALYQ9UKM9 306 aaKnown RBP12.15□□□□□ -0.46
COL9A1-208ENST00000489611 FUT9Q9Y231 359 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 LY96Q9Y6Y9 160 aa12.15□□□□□ -0.46
COL9A1-208ENST00000489611 COL6A6A6NMZ7 2263 aa12.15□□□□□ -0.47
COL9A1-208ENST00000489611 FCN3O75636 299 aa12.14□□□□□ -0.47
COL9A1-208ENST00000489611 CDSNQ15517 529 aa12.14□□□□□ -0.47
COL9A1-208ENST00000489611 LINC01551Q86U37 167 aa12.14□□□□□ -0.47
COL9A1-208ENST00000489611 TECRQ9NZ01 308 aaKnown RBP12.14□□□□□ -0.47
COL9A1-208ENST00000489611 SMG1Q96Q15 3661 aaKnown RBP12.14□□□□□ -0.47
COL9A1-208ENST00000489611 LINC00869P0C866 280 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 IGFBP2P18065 325 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 PPOXP50336 477 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 GNB1P62873 340 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 C11orf52Q96A22 123 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 MRPL32Q9BYC8 188 aaKnown RBP12.13□□□□□ -0.47
COL9A1-208ENST00000489611 PCNX1Q96RV3 2341 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 GGCTO75223 188 aaKnown RBP12.13□□□□□ -0.47
COL9A1-208ENST00000489611 NDUFB4O95168 129 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 TYMSP04818 313 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 DEFA4P12838 97 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 NPPCP23582 126 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 S100A2P29034 98 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 ATP5G3P48201 142 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 NDUFA6P56556 154 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 UBE2G2P60604 165 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 GAMTQ14353 236 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 MUC15Q8N387 334 aa12.13□□□□□ -0.47
COL9A1-208ENST00000489611 SEPSECSQ9HD40 501 aaKnown RBP12.13□□□□□ -0.47
COL9A1-208ENST00000489611 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
COL9A1-208ENST00000489611 UQCRFS1P47985 274 aa12.12□□□□□ -0.47
COL9A1-208ENST00000489611 FAM78BQ5VT40 261 aa12.12□□□□□ -0.47
COL9A1-208ENST00000489611 TEX45Q8NA69 505 aa12.12□□□□□ -0.47
COL9A1-208ENST00000489611 OR2T10Q8NGZ9 312 aa12.12□□□□□ -0.47
COL9A1-208ENST00000489611 C9JCJ5 164 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms