RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 CADM3Q8N126 398 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 OR5B3Q8NH48 314 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 MRAPQ8TCY5 172 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 PRR25Q96S07 402 aa9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 SRSF8Q9BRL6 282 aaKnown RBP9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 F11RQ9Y624 299 aaKnown RBP9.39□□□□□ -0.91
SMARCD3-213ENST00000489503 CDS2O95674 445 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 HIST1H1BP16401 226 aaKnown RBP9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 EDN2P20800 178 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 HSPE1P61604 102 aaKnown RBP9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 DHODHQ02127 395 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 KLF5Q13887 457 aaPredicted RBP9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 SLC25A24Q6NUK1 477 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 ACSM6Q6P461 480 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 SLC35G3Q8N808 338 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 RBPMSQ93062 196 aaKnown RBP9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 EEF1AKMT3Q96AZ1 226 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 GPR146Q96CH1 333 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 RRNAD1Q96FB5 475 aaKnown RBP9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 TMEM56Q96MV1 263 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 SCGB3A2Q96PL1 93 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 PLEKHA3Q9HB20 300 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 FKBP11Q9NYL4 201 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 CACNG5Q9UF02 275 aa9.38□□□□□ -0.91
SMARCD3-213ENST00000489503 B3GALNT1O75752 331 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 ATG12O94817 140 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 IFNA17P01571 189 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 VAMP1P23763 118 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 GPR183P32249 361 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 BTCP35070 178 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 ARL3P36405 182 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 KLK9Q2XQG4 91 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 HSD17B13Q7Z5P4 300 aaPredicted RBP9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 OR2C3Q8N628 320 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 ZNF502Q8TBZ5 544 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 GALNT14Q96FL9 552 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 KLK9Q9UKQ9 250 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 FLVCR2Q9UPI3 526 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 TMEM56-RWDD3S4R434 201 aa9.37□□□□□ -0.91
SMARCD3-213ENST00000489503 TGP01266 2768 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 IGHV3-35A0A0C4DH35 117 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 K7EIM0 57 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 OR2C1O95371 312 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 LY86O95711 162 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 IGHV3-48P01763 117 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 HOXA1P49639 335 aaPredicted RBP9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 PPP1R1AQ13522 171 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 ANKRD55Q3KP44 614 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 IL34Q6ZMJ4 242 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 REC114Q7Z4M0 266 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 LYZL2Q7Z4W2 148 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 ZNF429Q86V71 674 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 OR9G4Q8NGQ1 327 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 MISP3Q96FF7 219 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 SELENOKQ9Y6D0 94 aa9.36□□□□□ -0.91
SMARCD3-213ENST00000489503 RBMS2Q15434 407 aaKnown RBP9.35□□□□□ -0.91
SMARCD3-213ENST00000489503 CENPSQ8N2Z9 138 aa9.35□□□□□ -0.91
SMARCD3-213ENST00000489503 UBAC2Q8NBM4 344 aa9.35□□□□□ -0.91
SMARCD3-213ENST00000489503 DEDD2Q8WXF8 326 aa9.35□□□□□ -0.91
SMARCD3-213ENST00000489503 CACNG8Q8WXS5 425 aa9.35□□□□□ -0.91
SMARCD3-213ENST00000489503 PINX1Q96BK5 328 aaKnown RBP9.35□□□□□ -0.91
SMARCD3-213ENST00000489503 CXorf58Q96LI9 332 aa9.35□□□□□ -0.91
SMARCD3-213ENST00000489503 OR4C12Q96R67 309 aa9.35□□□□□ -0.91
SMARCD3-213ENST00000489503 SLC25A21Q9BQT8 299 aaPredicted RBP9.35□□□□□ -0.91
SMARCD3-213ENST00000489503 PDCD10Q9BUL8 212 aa9.35□□□□□ -0.91
SMARCD3-213ENST00000489503 KCNIP3Q9Y2W7 256 aa9.35□□□□□ -0.91
SMARCD3-213ENST00000489503 NAP1L6A6NFF2 107 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 OR2T8A6NH00 312 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 F8W735 103 aaPredicted RBP9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 PLA2G10O15496 165 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 GGCTO75223 188 aaKnown RBP9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 NDUFB6O95139 128 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 CLEC3BP05452 202 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 CSN3P07498 182 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 ANXA3P12429 323 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 SPNP16150 400 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 NMSQ5H8A3 153 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 ADAMTSL5Q6ZMM2 481 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 FAM219AQ8IW50 185 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 LGI3Q8N145 548 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 ZNF114Q8NC26 417 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 OR1P1Q8NH06 330 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 SCARB1Q8WTV0 552 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 IL22RA2Q969J5 263 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 ELOVL1Q9BW60 279 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 PTTG2Q9NZH5 202 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 THYN1Q9P016 225 aa9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 ZNF256Q9Y2P7 627 aaPredicted RBP9.34□□□□□ -0.91
SMARCD3-213ENST00000489503 IGHV3OR16-8A0A075B7F1 116 aa9.33□□□□□ -0.92
SMARCD3-213ENST00000489503 TRBV7-1A0A0A6YYK4 115 aa9.33□□□□□ -0.92
SMARCD3-213ENST00000489503 A0A0B4J2A0 478 aa9.33□□□□□ -0.92
SMARCD3-213ENST00000489503 I3L2K1 104 aa9.33□□□□□ -0.92
SMARCD3-213ENST00000489503 CYB5BO43169 146 aa9.33□□□□□ -0.92
SMARCD3-213ENST00000489503 TGOLN2O43493 480 aa9.33□□□□□ -0.92
SMARCD3-213ENST00000489503 SFT2D2O95562 160 aa9.33□□□□□ -0.92
SMARCD3-213ENST00000489503 MT-CO2P00403 227 aa9.33□□□□□ -0.92
SMARCD3-213ENST00000489503 SULT1A3P0DMM9 295 aa9.33□□□□□ -0.92
SMARCD3-213ENST00000489503 SULT1A4P0DMN0 295 aa9.33□□□□□ -0.92
SMARCD3-213ENST00000489503 RNASE2P10153 161 aaKnown RBP9.33□□□□□ -0.92
SMARCD3-213ENST00000489503 ANXA7P20073 488 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms