RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 SGMS2Q8NHU3 365 aa11.21□□□□□ -0.61
CLDN11-209ENST00000489485 RCL1Q9Y2P8 373 aaKnown RBP11.21□□□□□ -0.61
CLDN11-209ENST00000489485 G3V318 75 aa11.21□□□□□ -0.62
CLDN11-209ENST00000489485 IAPPP10997 89 aa11.21□□□□□ -0.62
CLDN11-209ENST00000489485 EGR2P11161 476 aaPredicted RBP11.21□□□□□ -0.62
CLDN11-209ENST00000489485 HOXA1P49639 335 aaPredicted RBP11.21□□□□□ -0.62
CLDN11-209ENST00000489485 PRCDQ00LT1 54 aa11.21□□□□□ -0.62
CLDN11-209ENST00000489485 TMEM267Q0VDI3 215 aaPredicted RBP11.21□□□□□ -0.62
CLDN11-209ENST00000489485 UNQ5815/PRO19632Q6UWF5 114 aa11.21□□□□□ -0.62
CLDN11-209ENST00000489485 STPG2Q8N412 459 aa11.21□□□□□ -0.62
CLDN11-209ENST00000489485 SUN5Q8TC36 379 aa11.21□□□□□ -0.62
CLDN11-209ENST00000489485 DTD1Q8TEA8 209 aa11.21□□□□□ -0.62
CLDN11-209ENST00000489485 PLEKHA3Q9HB20 300 aa11.21□□□□□ -0.62
CLDN11-209ENST00000489485 OR5AC2Q9NZP5 309 aa11.21□□□□□ -0.62
CLDN11-209ENST00000489485 CACFD1Q9UGQ2 172 aa11.21□□□□□ -0.62
CLDN11-209ENST00000489485 RNF114Q9Y508 228 aa11.21□□□□□ -0.62
CLDN11-209ENST00000489485 FBN1P35555 2871 aaKnown RBP11.21□□□□□ -0.62
CLDN11-209ENST00000489485 COL6A5A8TX70 2615 aa11.2□□□□□ -0.62
CLDN11-209ENST00000489485 TRAV14DV4A0A0A6YYC5 116 aa11.2□□□□□ -0.62
CLDN11-209ENST00000489485 TRAV41A0A0B4J266 112 aa11.2□□□□□ -0.62
CLDN11-209ENST00000489485 G3V3Q6 166 aa11.2□□□□□ -0.62
CLDN11-209ENST00000489485 H0YIZ8 118 aa11.2□□□□□ -0.62
CLDN11-209ENST00000489485 MED6O75586 246 aa11.2□□□□□ -0.62
CLDN11-209ENST00000489485 FGL1Q08830 312 aa11.2□□□□□ -0.62
CLDN11-209ENST00000489485 FOXL1Q12952 345 aa11.2□□□□□ -0.62
CLDN11-209ENST00000489485 EXOSC2Q13868 293 aaKnown RBP11.2□□□□□ -0.62
CLDN11-209ENST00000489485 PDLIM3Q53GG5 364 aaPredicted RBP11.2□□□□□ -0.62
CLDN11-209ENST00000489485 CENPVQ7Z7K6 275 aaPredicted RBP11.2□□□□□ -0.62
CLDN11-209ENST00000489485 ZFP57Q9NU63 452 aa11.2□□□□□ -0.62
CLDN11-209ENST00000489485 CLPSL1A2RUU4 121 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 L7N2F9 121 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 DEDDO75618 318 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 RLN2P04090 185 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 AKIRIN2Q53H80 203 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 ZNF329Q86UD4 541 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 THAP6Q8TBB0 222 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 TMEM158Q8WZ71 300 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 RNF126Q9BV68 326 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 C19orf24Q9BVV8 132 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 ENY2Q9NPA8 101 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 HEYLQ9NQ87 328 aaPredicted RBP11.19□□□□□ -0.62
CLDN11-209ENST00000489485 MBD2Q9UBB5 411 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 A0A1W2PN81 502 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 TEX22C9J3V5 150 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 H3BP45 60 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 TMEM50AO95807 157 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 REG1AP05451 166 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 PET100P0DJ07 73 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 CHRNA7P36544 502 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 WT1-ASQ06250 92 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 OPCMLQ14982 345 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 HIPK2Q9H2X6 1198 aa11.19□□□□□ -0.62
CLDN11-209ENST00000489485 A0A1B0GUS0 222 aa11.18□□□□□ -0.62
CLDN11-209ENST00000489485 HMSDA8MTL9 139 aa11.18□□□□□ -0.62
CLDN11-209ENST00000489485 OR13C7P0DN81 318 aa11.18□□□□□ -0.62
CLDN11-209ENST00000489485 AREGP15514 252 aa11.18□□□□□ -0.62
CLDN11-209ENST00000489485 PVALBP20472 110 aaPredicted RBP11.18□□□□□ -0.62
CLDN11-209ENST00000489485 VAMP2P63027 116 aa11.18□□□□□ -0.62
CLDN11-209ENST00000489485 SLC35B1P78383 322 aa11.18□□□□□ -0.62
CLDN11-209ENST00000489485 TOR2AQ5JU69 321 aa11.18□□□□□ -0.62
CLDN11-209ENST00000489485 PRSS54Q6PEW0 395 aa11.18□□□□□ -0.62
CLDN11-209ENST00000489485 COMMD7Q86VX2 200 aa11.18□□□□□ -0.62
CLDN11-209ENST00000489485 KLHDC1Q8N7A1 406 aa11.18□□□□□ -0.62
CLDN11-209ENST00000489485 OR5T1Q8NG75 326 aa11.18□□□□□ -0.62
CLDN11-209ENST00000489485 RAB40CQ96S21 281 aa11.18□□□□□ -0.62
CLDN11-209ENST00000489485 TENM1Q9UKZ4 2725 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 IGLC7A0M8Q6 106 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 TMEM89A2RUT3 159 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 PSMB11A5LHX3 300 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 CRIP2P52943 208 aaPredicted RBP11.17□□□□□ -0.62
CLDN11-209ENST00000489485 PAX9P55771 341 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 RIPPLY3P57055 190 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 ASPHD1Q5U4P2 390 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 C10orf99Q6UWK7 81 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 TMEM68Q96MH6 324 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 WNT10AQ9GZT5 417 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 FXYD6-FXYD2A0A087WZ82 144 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 RPS10-NUDT3A0A1W2PQS6 291 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 CAV2P51636 162 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 ERHP84090 104 aaKnown RBP11.17□□□□□ -0.62
CLDN11-209ENST00000489485 SPANXN5Q5MJ07 72 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 LRRC20Q8TCA0 184 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 DCUN1D4Q92564 292 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 CIB3Q96Q77 187 aaPredicted RBP11.17□□□□□ -0.62
CLDN11-209ENST00000489485 ZNF355PQ9NSJ1 428 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 PSENENQ9NZ42 101 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 ZNF580Q9UK33 172 aa11.17□□□□□ -0.62
CLDN11-209ENST00000489485 E5RGE8 158 aa11.16□□□□□ -0.62
CLDN11-209ENST00000489485 IFNA10P01566 189 aa11.16□□□□□ -0.62
CLDN11-209ENST00000489485 PPIFP30405 207 aaKnown RBP11.16□□□□□ -0.62
CLDN11-209ENST00000489485 SNCAP37840 140 aa11.16□□□□□ -0.62
CLDN11-209ENST00000489485 PROK1P58294 105 aa11.16□□□□□ -0.62
CLDN11-209ENST00000489485 AWAT1Q58HT5 328 aa11.16□□□□□ -0.62
CLDN11-209ENST00000489485 C19orf35Q6ZS72 473 aa11.16□□□□□ -0.62
CLDN11-209ENST00000489485 MRPL41Q8IXM3 137 aaKnown RBP11.16□□□□□ -0.62
CLDN11-209ENST00000489485 OR5AU1Q8NGC0 362 aa11.16□□□□□ -0.62
CLDN11-209ENST00000489485 SMIM8Q96KF7 97 aa11.16□□□□□ -0.62
CLDN11-209ENST00000489485 C11orf1Q9H5F2 150 aa11.16□□□□□ -0.62
CLDN11-209ENST00000489485 I3L521 148 aa11.15□□□□□ -0.62
CLDN11-209ENST00000489485 SOX15O60248 233 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms