RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 SBSPONQ8IVN8 264 aa16.02■□□□□ 0.16
LIME1-207ENST00000489212 Q8N402 240 aa16.02■□□□□ 0.16
LIME1-207ENST00000489212 CCDC71LQ8N9Z2 235 aa16.02■□□□□ 0.16
LIME1-207ENST00000489212 VN1R17PQ8TDU5 208 aa16.02■□□□□ 0.16
LIME1-207ENST00000489212 RSL24D1Q9UHA3 163 aaKnown RBP16.02■□□□□ 0.16
LIME1-207ENST00000489212 FABP12A6NFH5 140 aa16.01■□□□□ 0.15
LIME1-207ENST00000489212 CCDC160A6NGH7 325 aa16.01■□□□□ 0.15
LIME1-207ENST00000489212 FOLR2P14207 255 aa16.01■□□□□ 0.15
LIME1-207ENST00000489212 UCP1P25874 307 aa16.01■□□□□ 0.15
LIME1-207ENST00000489212 PRCDQ00LT1 54 aa16.01■□□□□ 0.15
LIME1-207ENST00000489212 CD300EQ496F6 205 aaPredicted RBP16.01■□□□□ 0.15
LIME1-207ENST00000489212 LCN12Q6JVE5 192 aa16.01■□□□□ 0.15
LIME1-207ENST00000489212 OR2C3Q8N628 320 aa16.01■□□□□ 0.15
LIME1-207ENST00000489212 CACNG8Q8WXS5 425 aa16.01■□□□□ 0.15
LIME1-207ENST00000489212 C5orf66Q9H5L9 145 aa16.01■□□□□ 0.15
LIME1-207ENST00000489212 A0A0B4J293 547 aa16■□□□□ 0.15
LIME1-207ENST00000489212 IGHV3-35A0A0C4DH35 117 aa16■□□□□ 0.15
LIME1-207ENST00000489212 TMEM213A2RRL7 107 aa16■□□□□ 0.15
LIME1-207ENST00000489212 F8W735 103 aaPredicted RBP16■□□□□ 0.15
LIME1-207ENST00000489212 K7EIM0 57 aa16■□□□□ 0.15
LIME1-207ENST00000489212 CYB5BO43169 146 aa16■□□□□ 0.15
LIME1-207ENST00000489212 IGHV4-30-4P0DP06 118 aa16■□□□□ 0.15
LIME1-207ENST00000489212 HSPE1P61604 102 aaKnown RBP16■□□□□ 0.15
LIME1-207ENST00000489212 TRIM16LQ309B1 348 aa16■□□□□ 0.15
LIME1-207ENST00000489212 DEFB114Q30KQ6 69 aa16■□□□□ 0.15
LIME1-207ENST00000489212 FAM106AQ4KMX7 169 aa16■□□□□ 0.15
LIME1-207ENST00000489212 UNQ9165/PRO28630Q6UXU0 137 aa16■□□□□ 0.15
LIME1-207ENST00000489212 OR51S1Q8NGJ8 323 aa16■□□□□ 0.15
LIME1-207ENST00000489212 SCARB1Q8WTV0 552 aa16■□□□□ 0.15
LIME1-207ENST00000489212 GPR132Q9UNW8 380 aa16■□□□□ 0.15
LIME1-207ENST00000489212 A0A0G2JRQ6 117 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 ZNF320A2RRD8 509 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 OR2T8A6NH00 312 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 A8MWP6 167 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 TGOLN2O43493 480 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 AKR1C2P52895 323 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 SURF2Q15527 256 aaPredicted RBP15.99■□□□□ 0.15
LIME1-207ENST00000489212 SPINK9Q5DT21 86 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 PLET1Q6UQ28 207 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 OR2K2Q8NGT1 345 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 OR1P1Q8NH06 330 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 DYNLRB2Q8TF09 96 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 C14orf166Q9Y224 244 aaKnown RBP15.99■□□□□ 0.15
LIME1-207ENST00000489212 SELENOKQ9Y6D0 94 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 U3KQK5 164 aa15.99■□□□□ 0.15
LIME1-207ENST00000489212 ZNF785A8K8V0 405 aa15.98■□□□□ 0.15
LIME1-207ENST00000489212 OR5AC1P0C628 307 aa15.98■□□□□ 0.15
LIME1-207ENST00000489212 CBLN1P23435 193 aa15.98■□□□□ 0.15
LIME1-207ENST00000489212 TM4SF20Q53R12 229 aa15.98■□□□□ 0.15
LIME1-207ENST00000489212 LHFPL5Q8TAF8 219 aa15.98■□□□□ 0.15
LIME1-207ENST00000489212 PRRT1Q99946 306 aa15.98■□□□□ 0.15
LIME1-207ENST00000489212 NAA60Q9H7X0 242 aa15.98■□□□□ 0.15
LIME1-207ENST00000489212 C19orf73Q9NVV2 129 aa15.98■□□□□ 0.15
LIME1-207ENST00000489212 SLC2A8Q9NY64 477 aa15.98■□□□□ 0.15
LIME1-207ENST00000489212 C21orf62Q9NYP8 219 aa15.98■□□□□ 0.15
LIME1-207ENST00000489212 ST8SIA3O43173 380 aa15.97■□□□□ 0.15
LIME1-207ENST00000489212 ZNF114Q8NC26 417 aa15.97■□□□□ 0.15
LIME1-207ENST00000489212 OR1L6Q8NGR2 347 aa15.97■□□□□ 0.15
LIME1-207ENST00000489212 GLYATL2Q8WU03 294 aa15.97■□□□□ 0.15
LIME1-207ENST00000489212 CHRDL1Q9BU40 450 aa15.97■□□□□ 0.15
LIME1-207ENST00000489212 ZNF436Q9C0F3 470 aaPredicted RBP15.97■□□□□ 0.15
LIME1-207ENST00000489212 TMEM222Q9H0R3 208 aa15.97■□□□□ 0.15
LIME1-207ENST00000489212 PLEKHA3Q9HB20 300 aa15.97■□□□□ 0.15
LIME1-207ENST00000489212 V9GYH0 126 aa15.97■□□□□ 0.15
LIME1-207ENST00000489212 A8MZ25 164 aa15.96■□□□□ 0.15
LIME1-207ENST00000489212 B3GALNT1O75752 331 aa15.96■□□□□ 0.15
LIME1-207ENST00000489212 ATG12O94817 140 aa15.96■□□□□ 0.15
LIME1-207ENST00000489212 CDS2O95674 445 aa15.96■□□□□ 0.15
LIME1-207ENST00000489212 Q6ZRM9 215 aa15.96■□□□□ 0.15
LIME1-207ENST00000489212 SGPP2Q8IWX5 399 aa15.96■□□□□ 0.15
LIME1-207ENST00000489212 TRIM63Q969Q1 353 aa15.96■□□□□ 0.15
LIME1-207ENST00000489212 BSCL2Q96G97 398 aaPredicted RBP15.96■□□□□ 0.15
LIME1-207ENST00000489212 TECRQ9NZ01 308 aaKnown RBP15.96■□□□□ 0.15
LIME1-207ENST00000489212 MLXQ9UH92 298 aa15.96■□□□□ 0.15
LIME1-207ENST00000489212 TEX13DA0A0J9YY54 714 aaPredicted RBP15.95■□□□□ 0.14
LIME1-207ENST00000489212 CRYM-AS1A6NIL9 109 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 I3L2K1 104 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 ADMP35318 185 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 ZNF79Q15937 498 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 GTSCR1Q86UQ5 136 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 UXS1Q8NBZ7 420 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 TMEM230Q96A57 120 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 MISP3Q96FF7 219 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 WDR89Q96FK6 387 aaPredicted RBP15.95■□□□□ 0.14
LIME1-207ENST00000489212 ZNF414Q96IQ9 312 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 WWC2-AS2Q96NR7 200 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 ATP6V0BQ99437 205 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 MCUBQ9NWR8 336 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 DNAH7Q8WXX0 4024 aa15.95■□□□□ 0.14
LIME1-207ENST00000489212 C8orf88P0DMB2 117 aa15.94■□□□□ 0.14
LIME1-207ENST00000489212 ERHP84090 104 aaKnown RBP15.94■□□□□ 0.14
LIME1-207ENST00000489212 KLF9Q13886 244 aaPredicted RBP15.94■□□□□ 0.14
LIME1-207ENST00000489212 PYDC2Q56P42 97 aa15.94■□□□□ 0.14
LIME1-207ENST00000489212 SELENOHQ8IZQ5 122 aaKnown RBP15.94■□□□□ 0.14
LIME1-207ENST00000489212 UBAC2Q8NBM4 344 aa15.94■□□□□ 0.14
LIME1-207ENST00000489212 TMEM190Q8WZ59 177 aa15.94■□□□□ 0.14
LIME1-207ENST00000489212 RRNAD1Q96FB5 475 aaKnown RBP15.94■□□□□ 0.14
LIME1-207ENST00000489212 SCP2D1Q9UJQ7 156 aa15.94■□□□□ 0.14
LIME1-207ENST00000489212 INS-IGF2F8WCM5 200 aa15.93■□□□□ 0.14
LIME1-207ENST00000489212 ZNF701M0R085 212 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms