RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ZNF57Q68EA5 555 aaPredicted RBP10.54□□□□□ -0.72
VTI1A-206ENST00000489142 HSD17B13Q7Z5P4 300 aaPredicted RBP10.54□□□□□ -0.72
VTI1A-206ENST00000489142 OR13C8Q8NGS7 320 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 OR5B3Q8NH48 314 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 MUC7Q8TAX7 377 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 VN1R17PQ8TDU5 208 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 SCARB1Q8WTV0 552 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 MISP3Q96FF7 219 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 TMEM56Q96MV1 263 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 FAM110AQ9BQ89 295 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 CHRDL1Q9BU40 450 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 SRD5A3Q9H8P0 318 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 SLC2A8Q9NY64 477 aa10.54□□□□□ -0.72
VTI1A-206ENST00000489142 RBMY1BA6NDE4 496 aaKnown RBP10.53□□□□□ -0.72
VTI1A-206ENST00000489142 RBMY1EA6NEQ0 496 aaKnown RBP10.53□□□□□ -0.72
VTI1A-206ENST00000489142 OR11H12B2RN74 326 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 K7EIM0 57 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 RAB3DO95716 219 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 IGKV1-5P01602 117 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 RBMY1DP0C7P1 496 aaKnown RBP10.53□□□□□ -0.72
VTI1A-206ENST00000489142 RND3P61587 244 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 Q56UQ5 140 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 ARRDC1Q8N5I2 433 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 TMEM229BQ8NBD8 167 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 TSC22D3Q99576 134 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 SPATA25Q9BR10 227 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 ZNF436Q9C0F3 470 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-206ENST00000489142 FAM212BQ9NTI7 297 aaPredicted RBP10.53□□□□□ -0.72
VTI1A-206ENST00000489142 FKBP11Q9NYL4 201 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 C21orf62Q9NYP8 219 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 CEPT1Q9Y6K0 416 aa10.53□□□□□ -0.72
VTI1A-206ENST00000489142 C3orf84H3BNL1 204 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 GABARAPH6UMI1 98 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 CD74P04233 296 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 TBPP20226 339 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 ADMP35318 185 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 TAS2R19P59542 299 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 PRCDQ00LT1 54 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 IL18Q14116 193 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 ZFAND6Q6FIF0 208 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 STEAP1BQ6NZ63 245 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 CADM3Q8N126 398 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 OR2C3Q8N628 320 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 DYNC2LI1Q8TCX1 351 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 TMEM190Q8WZ59 177 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 C20orf24Q9BUV8 137 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 PALMDQ9NP74 551 aa10.52□□□□□ -0.73
VTI1A-206ENST00000489142 C3orf85A0A1B0GTC6 90 aa10.51□□□□□ -0.73
VTI1A-206ENST00000489142 AKR1C2P52895 323 aa10.51□□□□□ -0.73
VTI1A-206ENST00000489142 TRIM16LQ309B1 348 aa10.51□□□□□ -0.73
VTI1A-206ENST00000489142 CASC10Q5T4H9 136 aa10.51□□□□□ -0.73
VTI1A-206ENST00000489142 OR52B4Q8NGK2 314 aa10.51□□□□□ -0.73
VTI1A-206ENST00000489142 OR1P1Q8NH06 330 aa10.51□□□□□ -0.73
VTI1A-206ENST00000489142 TERB2Q8NHR7 220 aa10.51□□□□□ -0.73
VTI1A-206ENST00000489142 RAB2BQ8WUD1 216 aa10.51□□□□□ -0.73
VTI1A-206ENST00000489142 PINX1Q96BK5 328 aaKnown RBP10.51□□□□□ -0.73
VTI1A-206ENST00000489142 BSCL2Q96G97 398 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-206ENST00000489142 ZNF486Q96H40 463 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-206ENST00000489142 DIRAS2Q96HU8 199 aa10.51□□□□□ -0.73
VTI1A-206ENST00000489142 CITED4Q96RK1 184 aa10.51□□□□□ -0.73
VTI1A-206ENST00000489142 C6orf62Q9GZU0 229 aaPredicted RBP10.51□□□□□ -0.73
VTI1A-206ENST00000489142 CCDC59Q9P031 241 aaKnown RBP10.51□□□□□ -0.73
VTI1A-206ENST00000489142 COPZ2Q9P299 210 aa10.51□□□□□ -0.73
VTI1A-206ENST00000489142 UFC1Q9Y3C8 167 aa10.51□□□□□ -0.73
VTI1A-206ENST00000489142 A0A0B4J293 547 aa10.5□□□□□ -0.73
VTI1A-206ENST00000489142 A0A0G2JRQ6 117 aa10.5□□□□□ -0.73
VTI1A-206ENST00000489142 ST8SIA3O43173 380 aa10.5□□□□□ -0.73
VTI1A-206ENST00000489142 P0C879 139 aa10.5□□□□□ -0.73
VTI1A-206ENST00000489142 C8orf88P0DMB2 117 aa10.5□□□□□ -0.73
VTI1A-206ENST00000489142 HSPE1P61604 102 aaKnown RBP10.5□□□□□ -0.73
VTI1A-206ENST00000489142 LINC00322Q6ZN03 302 aaPredicted RBP10.5□□□□□ -0.73
VTI1A-206ENST00000489142 OR4C16Q8NGL9 310 aa10.5□□□□□ -0.73
VTI1A-206ENST00000489142 ZFAND1Q8TCF1 268 aa10.5□□□□□ -0.73
VTI1A-206ENST00000489142 C15orf40Q8WUR7 153 aa10.5□□□□□ -0.73
VTI1A-206ENST00000489142 SMIM4Q8WVI0 70 aa10.5□□□□□ -0.73
VTI1A-206ENST00000489142 ZNF414Q96IQ9 312 aa10.5□□□□□ -0.73
VTI1A-206ENST00000489142 GAR1Q9NY12 217 aaKnown RBP10.5□□□□□ -0.73
VTI1A-206ENST00000489142 MRPL27Q9P0M9 148 aaKnown RBP10.5□□□□□ -0.73
VTI1A-206ENST00000489142 IGHV3-49A0A0A0MS15 119 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 H3BMQ9 156 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 I3L2K1 104 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 MT-CO2P00403 227 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 LYL1P12980 280 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 TMBIM6P55061 237 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 SPSB3Q6PJ21 355 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 RBPMS2Q6ZRY4 209 aaKnown RBP10.49□□□□□ -0.73
VTI1A-206ENST00000489142 SLC16A13Q7RTY0 426 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 SLC35G3Q8N808 338 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 CCDC71LQ8N9Z2 235 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 RNASE11Q8TAA1 199 aaKnown RBP10.49□□□□□ -0.73
VTI1A-206ENST00000489142 HIPK2Q9H2X6 1198 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 EDA2RQ9HAV5 297 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 DAZ1Q9NQZ3 744 aaKnown RBP10.49□□□□□ -0.73
VTI1A-206ENST00000489142 UBQLN2Q9UHD9 624 aa10.49□□□□□ -0.73
VTI1A-206ENST00000489142 NDUFA4O00483 81 aa10.48□□□□□ -0.73
VTI1A-206ENST00000489142 NOL3O60936 208 aaKnown RBP10.48□□□□□ -0.73
VTI1A-206ENST00000489142 IFNA17P01571 189 aa10.48□□□□□ -0.73
VTI1A-206ENST00000489142 CTSDP07339 412 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-206ENST00000489142 CTSGP08311 255 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms