RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 DYNC2H1Q8NCM8 4307 aaKnown RBP17.27■□□□□ 0.35
COL9A3-213ENST00000489045 CD3DP04234 171 aa17.26■□□□□ 0.35
COL9A3-213ENST00000489045 C8orf88P0DMB2 117 aa17.26■□□□□ 0.35
COL9A3-213ENST00000489045 ELLP55199 621 aaPredicted RBP17.26■□□□□ 0.35
COL9A3-213ENST00000489045 RNASE10Q5GAN6 216 aaKnown RBP17.26■□□□□ 0.35
COL9A3-213ENST00000489045 ZFAND6Q6FIF0 208 aa17.26■□□□□ 0.35
COL9A3-213ENST00000489045 SLC16A13Q7RTY0 426 aa17.26■□□□□ 0.35
COL9A3-213ENST00000489045 H2BFWTQ7Z2G1 175 aa17.26■□□□□ 0.35
COL9A3-213ENST00000489045 OR52B4Q8NGK2 314 aa17.26■□□□□ 0.35
COL9A3-213ENST00000489045 SCARB1Q8WTV0 552 aa17.26■□□□□ 0.35
COL9A3-213ENST00000489045 TMEM190Q8WZ59 177 aa17.26■□□□□ 0.35
COL9A3-213ENST00000489045 MRGPRFQ96AM1 343 aa17.26■□□□□ 0.35
COL9A3-213ENST00000489045 HIPK2Q9H2X6 1198 aa17.26■□□□□ 0.35
COL9A3-213ENST00000489045 MRPL27Q9P0M9 148 aaKnown RBP17.26■□□□□ 0.35
COL9A3-213ENST00000489045 CSMD3Q7Z407 3707 aa17.26■□□□□ 0.35
COL9A3-213ENST00000489045 K7EIM0 57 aa17.25■□□□□ 0.35
COL9A3-213ENST00000489045 PGAM2P15259 253 aa17.25■□□□□ 0.35
COL9A3-213ENST00000489045 LHFPL1Q86WI0 220 aa17.25■□□□□ 0.35
COL9A3-213ENST00000489045 OR1L6Q8NGR2 347 aa17.25■□□□□ 0.35
COL9A3-213ENST00000489045 OR4A16Q8NH70 328 aa17.25■□□□□ 0.35
COL9A3-213ENST00000489045 ABHD1Q96SE0 405 aa17.25■□□□□ 0.35
COL9A3-213ENST00000489045 MRPS26Q9BYN8 205 aaKnown RBP17.25■□□□□ 0.35
COL9A3-213ENST00000489045 F8W735 103 aaPredicted RBP17.24■□□□□ 0.35
COL9A3-213ENST00000489045 PI3P19957 117 aa17.24■□□□□ 0.35
COL9A3-213ENST00000489045 RND3P61587 244 aa17.24■□□□□ 0.35
COL9A3-213ENST00000489045 SPSB3Q6PJ21 355 aa17.24■□□□□ 0.35
COL9A3-213ENST00000489045 ARRDC1Q8N5I2 433 aa17.24■□□□□ 0.35
COL9A3-213ENST00000489045 UBAC2Q8NBM4 344 aa17.24■□□□□ 0.35
COL9A3-213ENST00000489045 OR1P1Q8NH06 330 aa17.24■□□□□ 0.35
COL9A3-213ENST00000489045 ZNF486Q96H40 463 aaPredicted RBP17.24■□□□□ 0.35
COL9A3-213ENST00000489045 ATP6V0BQ99437 205 aa17.24■□□□□ 0.35
COL9A3-213ENST00000489045 FAM110AQ9BQ89 295 aa17.24■□□□□ 0.35
COL9A3-213ENST00000489045 CHRDL1Q9BU40 450 aa17.24■□□□□ 0.35
COL9A3-213ENST00000489045 MTFP1Q9UDX5 166 aa17.24■□□□□ 0.35
COL9A3-213ENST00000489045 TBPP20226 339 aa17.23■□□□□ 0.35
COL9A3-213ENST00000489045 Q56UQ5 140 aa17.23■□□□□ 0.35
COL9A3-213ENST00000489045 RBPMS2Q6ZRY4 209 aaKnown RBP17.23■□□□□ 0.35
COL9A3-213ENST00000489045 GPR141Q7Z602 305 aa17.23■□□□□ 0.35
COL9A3-213ENST00000489045 MIXL1Q9H2W2 232 aa17.23■□□□□ 0.35
COL9A3-213ENST00000489045 TENM2Q9NT68 2774 aa17.22■□□□□ 0.35
COL9A3-213ENST00000489045 TRAV25A0A0B4J276 109 aa17.22■□□□□ 0.35
COL9A3-213ENST00000489045 ADMP35318 185 aa17.22■□□□□ 0.35
COL9A3-213ENST00000489045 ALDH3B2P48448 385 aa17.22■□□□□ 0.35
COL9A3-213ENST00000489045 PPP5CP53041 499 aa17.22■□□□□ 0.35
COL9A3-213ENST00000489045 PIGPP57054 158 aa17.22■□□□□ 0.35
COL9A3-213ENST00000489045 PRCDQ00LT1 54 aa17.22■□□□□ 0.35
COL9A3-213ENST00000489045 ANKRD55Q3KP44 614 aa17.22■□□□□ 0.35
COL9A3-213ENST00000489045 OR2C3Q8N628 320 aa17.22■□□□□ 0.35
COL9A3-213ENST00000489045 OR4D10Q8NGI6 311 aa17.22■□□□□ 0.35
COL9A3-213ENST00000489045 DAZ1Q9NQZ3 744 aaKnown RBP17.22■□□□□ 0.35
COL9A3-213ENST00000489045 NDUFA4O00483 81 aa17.21■□□□□ 0.35
COL9A3-213ENST00000489045 IZUMO4Q1ZYL8 232 aa17.21■□□□□ 0.35
COL9A3-213ENST00000489045 C15orf40Q8WUR7 153 aa17.21■□□□□ 0.35
COL9A3-213ENST00000489045 MISP3Q96FF7 219 aa17.21■□□□□ 0.35
COL9A3-213ENST00000489045 TP53RKQ96S44 253 aa17.21■□□□□ 0.35
COL9A3-213ENST00000489045 IGHV3OR16-8A0A075B7F1 116 aa17.2■□□□□ 0.34
COL9A3-213ENST00000489045 RGS5O15539 181 aa17.2■□□□□ 0.34
COL9A3-213ENST00000489045 HSPE1P61604 102 aaKnown RBP17.2■□□□□ 0.34
COL9A3-213ENST00000489045 SPCS2Q15005 226 aa17.2■□□□□ 0.34
COL9A3-213ENST00000489045 TMEM229BQ8NBD8 167 aa17.2■□□□□ 0.34
COL9A3-213ENST00000489045 ZNF114Q8NC26 417 aa17.2■□□□□ 0.34
COL9A3-213ENST00000489045 C20orf24Q9BUV8 137 aa17.2■□□□□ 0.34
COL9A3-213ENST00000489045 C5orf66Q9H5L9 145 aa17.2■□□□□ 0.34
COL9A3-213ENST00000489045 STARD9Q9P2P6 4700 aa17.2■□□□□ 0.34
COL9A3-213ENST00000489045 IGKV1-5P01602 117 aa17.19■□□□□ 0.34
COL9A3-213ENST00000489045 CD74P04233 296 aa17.19■□□□□ 0.34
COL9A3-213ENST00000489045 SPINK9Q5DT21 86 aa17.19■□□□□ 0.34
COL9A3-213ENST00000489045 C3orf85A0A1B0GTC6 90 aa17.18■□□□□ 0.34
COL9A3-213ENST00000489045 GABARAPH6UMI1 98 aa17.18■□□□□ 0.34
COL9A3-213ENST00000489045 I3L2K1 104 aa17.18■□□□□ 0.34
COL9A3-213ENST00000489045 ZNF207O43670 478 aaKnown RBP17.18■□□□□ 0.34
COL9A3-213ENST00000489045 RAB3DO95716 219 aa17.18■□□□□ 0.34
COL9A3-213ENST00000489045 CTSGP08311 255 aa17.18■□□□□ 0.34
COL9A3-213ENST00000489045 AKR1C2P52895 323 aa17.18■□□□□ 0.34
COL9A3-213ENST00000489045 TAS2R19P59542 299 aa17.18■□□□□ 0.34
COL9A3-213ENST00000489045 SCGB2B2Q4G0G5 96 aa17.18■□□□□ 0.34
COL9A3-213ENST00000489045 OR13C8Q8NGS7 320 aa17.18■□□□□ 0.34
COL9A3-213ENST00000489045 TERB2Q8NHR7 220 aa17.18■□□□□ 0.34
COL9A3-213ENST00000489045 ZNF414Q96IQ9 312 aa17.18■□□□□ 0.34
COL9A3-213ENST00000489045 CTDSP2O14595 271 aa17.17■□□□□ 0.34
COL9A3-213ENST00000489045 MT-CO2P00403 227 aa17.17■□□□□ 0.34
COL9A3-213ENST00000489045 P0C879 139 aa17.17■□□□□ 0.34
COL9A3-213ENST00000489045 STEAP1BQ6NZ63 245 aa17.17■□□□□ 0.34
COL9A3-213ENST00000489045 CLVS1Q8IUQ0 354 aaPredicted RBP17.17■□□□□ 0.34
COL9A3-213ENST00000489045 CCDC71LQ8N9Z2 235 aa17.17■□□□□ 0.34
COL9A3-213ENST00000489045 ZFAND1Q8TCF1 268 aa17.17■□□□□ 0.34
COL9A3-213ENST00000489045 SPAG8Q99932 426 aaPredicted RBP17.17■□□□□ 0.34
COL9A3-213ENST00000489045 GGTLC1Q9BX51 225 aa17.17■□□□□ 0.34
COL9A3-213ENST00000489045 GAR1Q9NY12 217 aaKnown RBP17.17■□□□□ 0.34
COL9A3-213ENST00000489045 COPZ2Q9P299 210 aa17.17■□□□□ 0.34
COL9A3-213ENST00000489045 K7EMT4 169 aa17.16■□□□□ 0.34
COL9A3-213ENST00000489045 TSPAN4O14817 238 aa17.16■□□□□ 0.34
COL9A3-213ENST00000489045 NUPL2O15504 423 aaKnown RBP17.16■□□□□ 0.34
COL9A3-213ENST00000489045 IGHV3-48P01763 117 aa17.16■□□□□ 0.34
COL9A3-213ENST00000489045 FCGR2BP31994 310 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-213ENST00000489045 MFAP4P55083 255 aa17.16■□□□□ 0.34
COL9A3-213ENST00000489045 ERHP84090 104 aaKnown RBP17.16■□□□□ 0.34
COL9A3-213ENST00000489045 TRIM16LQ309B1 348 aa17.16■□□□□ 0.34
COL9A3-213ENST00000489045 MARCH1Q8TCQ1 289 aa17.16■□□□□ 0.34
COL9A3-213ENST00000489045 PINX1Q96BK5 328 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms