RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 IDI2-AS1Q9NZ38 188 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 PRO2289Q9P1D8 64 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 RPL26L1Q9UNX3 145 aaKnown RBP1.3□□□□□ -2.2
RFC4-213ENST00000489028 FAM32AQ9Y421 112 aaKnown RBP1.3□□□□□ -2.2
RFC4-213ENST00000489028 RTL1A6NKG5 1358 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 CCDC144AA2RUR9 1427 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 PIK3C2GO75747 1445 aa1.3□□□□□ -2.2
RFC4-213ENST00000489028 IGHV1-18A0A0C4DH31 117 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 RFPL4AA6NLU0 287 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 RFPL4AL1F8VTS6 287 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 H3BRN7 92 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 SULT1B1O43704 296 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 C8GP07360 202 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 SMIM10L2AP0DMW4 78 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 SMIM10L2BP0DMW5 78 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 PPIBP23284 216 aaKnown RBP1.29□□□□□ -2.2
RFC4-213ENST00000489028 NDUFA5Q16718 116 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 SPANXN3Q5MJ09 141 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 TMEM42Q69YG0 159 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 PXT1Q8NFP0 134 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 OR52L1Q8NGH7 329 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 OR10X1Q8NGY0 326 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 GNPDA2Q8TDQ7 276 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 RASSF5Q8WWW0 418 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 TXNDC17Q9BRA2 123 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 C9orf16Q9BUW7 83 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 TTTY12Q9BZ98 90 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 OR8D2Q9GZM6 311 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 CXCL16Q9H2A7 254 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 ENY2Q9NPA8 101 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 UQCC1Q9NVA1 299 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 C14orf105Q9NVL8 296 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 ZNF532Q9HCE3 1301 aa1.29□□□□□ -2.2
RFC4-213ENST00000489028 IGLV3-9A0A075B6K5 115 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 hCG_1818297A0A087WSY0 165 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 TMSB15BA0A087X1C1 80 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 A8MT66 165 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 PPBPP02775 128 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 P0DMU3 169 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 FAM231AP0DMU4 169 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 FAM231CP0DMU5 169 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 PEBP1P30086 187 aaKnown RBP1.28□□□□□ -2.2
RFC4-213ENST00000489028 EVX1P49640 407 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 FXYD2P54710 66 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 DEFA1P59665 94 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 RUNX1Q01196 453 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 TAF1AQ15573 450 aaPredicted RBP1.28□□□□□ -2.2
RFC4-213ENST00000489028 MOGQ16653 247 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 C12orf74Q32Q52 190 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 HACD4Q5VWC8 232 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 KTN1-AS1Q86SY8 53 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 TMEM86AQ8N2M4 240 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 H1FXQ92522 213 aaKnown RBP1.28□□□□□ -2.2
RFC4-213ENST00000489028 C2orf50Q96LR7 162 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 RNASE7Q9H1E1 156 aaKnown RBP1.28□□□□□ -2.2
RFC4-213ENST00000489028 VCX3BQ9H321 246 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 ARMC1Q9NVT9 282 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 OPTCQ9UBM4 332 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 KDM5BQ9UGL1 1544 aa1.28□□□□□ -2.2
RFC4-213ENST00000489028 SIPA1L1O43166 1804 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 RTEL1-TNFRSF6BF6WH68 1400 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 TTC21AQ8NDW8 1320 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 A0A0G2JQZ4 141 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 TRBV10-2A0A0K0K1G8 114 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 FAM159BA6NKW6 160 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 HMSDA8MTL9 139 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 J3QKU1 62 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 J3QRK9 145 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 S1PR2O95136 353 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 ZNF682O95780 498 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 IGKV1-5P01602 117 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 RPS4Y1P22090 263 aaKnown RBP1.27□□□□□ -2.21
RFC4-213ENST00000489028 S100A4P26447 101 aaKnown RBP1.27□□□□□ -2.21
RFC4-213ENST00000489028 ERP29P30040 261 aaKnown RBP1.27□□□□□ -2.21
RFC4-213ENST00000489028 EIF2B2P49770 351 aaKnown RBP1.27□□□□□ -2.21
RFC4-213ENST00000489028 ZNF791Q3KP31 576 aaPredicted RBP1.27□□□□□ -2.21
RFC4-213ENST00000489028 SLC36A1Q7Z2H8 476 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 TMED4Q7Z7H5 227 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 S100A7AQ86SG5 101 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 LRRC28Q86X40 367 aaPredicted RBP1.27□□□□□ -2.21
RFC4-213ENST00000489028 OR11H6Q8NGC7 330 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 DCANP1Q8TF63 244 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 C11orf40Q8WZ69 217 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 AP3S1Q92572 193 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 TMEM106AQ96A25 262 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 SCGB3A1Q96QR1 104 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 GINS4Q9BRT9 223 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 PARVBQ9HBI1 364 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 C8orf4Q9NR00 106 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 SLC39A9Q9NUM3 307 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 TMEM106BQ9NUM4 274 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 TVP23BQ9NYZ1 205 aa1.27□□□□□ -2.21
RFC4-213ENST00000489028 BAHCC1Q9P281 2608 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 ROBO3Q96MS0 1386 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 IGKV1D-43A0A0B4J1Z2 117 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 A0A0D9SEW6 157 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 A0A0D9SG52 128 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 MEIS3P1A6NDR6 274 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 ZNF860A6NHJ4 632 aa1.26□□□□□ -2.21
RFC4-213ENST00000489028 E5RI56 91 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms