RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 HIST1H1EP10412 219 aaKnown RBP0.9□□□□□ -2.27
CD46-215ENST00000488596 DEFA1P59665 94 aa0.9□□□□□ -2.27
CD46-215ENST00000488596 SPCS3P61009 180 aa0.9□□□□□ -2.27
CD46-215ENST00000488596 RUNX1Q01196 453 aa0.9□□□□□ -2.27
CD46-215ENST00000488596 UNQ6190/PRO20217Q6UXQ8 127 aa0.9□□□□□ -2.27
CD46-215ENST00000488596 RPS19BP1Q86WX3 136 aaKnown RBP0.9□□□□□ -2.27
CD46-215ENST00000488596 MRPL30Q8TCC3 161 aaKnown RBP0.9□□□□□ -2.27
CD46-215ENST00000488596 DERL1Q9BUN8 251 aa0.9□□□□□ -2.27
CD46-215ENST00000488596 CYSTM1Q9H1C7 97 aa0.9□□□□□ -2.27
CD46-215ENST00000488596 SOX21Q9Y651 276 aaPredicted RBP0.9□□□□□ -2.27
CD46-215ENST00000488596 TONSLQ96HA7 1378 aa0.9□□□□□ -2.27
CD46-215ENST00000488596 TTC21AQ8NDW8 1320 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 MYO3BQ8WXR4 1341 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 KIF13BQ9NQT8 1826 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 IRGMA1A4Y4 181 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 MRPS14O60783 128 aaKnown RBP0.89□□□□□ -2.27
CD46-215ENST00000488596 AHSA1O95433 338 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 SHBGP04278 402 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 OR5G3P0C626 314 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 NFYAP23511 347 aaPredicted RBP0.89□□□□□ -2.27
CD46-215ENST00000488596 HIST1H2BOP23527 126 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 HIST1H2BBP33778 126 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 ZNF80P51504 273 aaPredicted RBP0.89□□□□□ -2.27
CD46-215ENST00000488596 FXYD2P54710 66 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 HIST1H2BDP58876 126 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 MAGOHP61326 146 aaKnown RBP0.89□□□□□ -2.27
CD46-215ENST00000488596 HIST1H2BCP62807 126 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 UBE2IP63279 158 aaKnown RBP0.89□□□□□ -2.27
CD46-215ENST00000488596 CCL20P78556 96 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 OR2F1Q13607 317 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 ZNF345Q14585 488 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 HIST2H2BEQ16778 126 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.89□□□□□ -2.27
CD46-215ENST00000488596 PTRHD1Q6GMV3 140 aaKnown RBP0.89□□□□□ -2.27
CD46-215ENST00000488596 C1orf158Q8N1D5 194 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 HIST1H2BHQ93079 126 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 HIST1H2BNQ99877 126 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 HIST1H2BMQ99879 126 aa0.89□□□□□ -2.27
CD46-215ENST00000488596 DOCK5Q9H7D0 1870 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 IGKV3-7A0A075B6H7 116 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 PSMD12O00232 456 aaPredicted RBP0.88□□□□□ -2.27
CD46-215ENST00000488596 METTL15P1P0C7V9 234 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 G6PCP35575 357 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 HBA1P69905 142 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 KCNJ8Q15842 424 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 C10orf55Q5SWW7 151 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 CCDC122Q5T0U0 273 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 IBA57Q5T440 356 aaKnown RBP0.88□□□□□ -2.27
CD46-215ENST00000488596 DCXRQ7Z4W1 244 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 BPIFA4PQ86YQ2 179 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 WFDC11Q8NEX6 87 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 PPP1R2P1Q96PQ5 205 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 REG4Q9BYZ8 158 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 C11orf68Q9H3H3 251 aaKnown RBP0.88□□□□□ -2.27
CD46-215ENST00000488596 MED13Q9UHV7 2174 aa0.88□□□□□ -2.27
CD46-215ENST00000488596 WRNQ14191 1432 aaPredicted RBP eCLIP0.88□□□□□ -2.27
CD46-215ENST00000488596 MTUS2Q5JR59 1369 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 IGKV1D-42A0A075B6H8 117 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 FAAHO00519 579 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 HCRTO43612 131 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 CHP2O43745 196 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 LYPLA2O95372 231 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 HLA-DRB1P01911 266 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 S100A6P06703 90 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 CD79AP11912 226 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 RPL5P46777 297 aaKnown RBP0.87□□□□□ -2.27
CD46-215ENST00000488596 MYL6P60660 151 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 SNRPD2P62316 118 aaKnown RBP0.87□□□□□ -2.27
CD46-215ENST00000488596 ZNF846Q147U1 533 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 HIST3H3Q16695 136 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 LCN15Q6UWW0 184 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 AAED1Q7RTV5 226 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 CLVS1Q8IUQ0 354 aaPredicted RBP0.87□□□□□ -2.27
CD46-215ENST00000488596 MCFD2Q8NI22 146 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 RASSF5Q8WWW0 418 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 C11orf40Q8WZ69 217 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 YIPF3Q9GZM5 350 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 FBXL12Q9NXK8 326 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 TOPBP1Q92547 1522 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 CUL9Q8IWT3 2517 aa0.87□□□□□ -2.27
CD46-215ENST00000488596 ADCY9O60503 1353 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 BAZ2BQ9UIF8 2168 aaKnown RBP0.86□□□□□ -2.27
CD46-215ENST00000488596 COL4A5P29400 1685 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 SMIM23A6NLE4 172 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 M0R036 132 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 IFNA16P05015 189 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 CRYGAP11844 174 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 HIST1H1TP22492 207 aaPredicted RBP0.86□□□□□ -2.27
CD46-215ENST00000488596 FKBP2P26885 142 aaKnown RBP0.86□□□□□ -2.27
CD46-215ENST00000488596 SULT1A1P50225 295 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 RPS20P60866 119 aaKnown RBP0.86□□□□□ -2.27
CD46-215ENST00000488596 ITGB3BPQ13352 177 aaPredicted RBP0.86□□□□□ -2.27
CD46-215ENST00000488596 SPANXN3Q5MJ09 141 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 RPL22L1Q6P5R6 122 aaKnown RBP0.86□□□□□ -2.27
CD46-215ENST00000488596 LRRC25Q8N386 305 aaPredicted RBP0.86□□□□□ -2.27
CD46-215ENST00000488596 ANKRD29Q8N6D5 301 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 DNAJC9Q8WXX5 260 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 TMEM106AQ96A25 262 aa0.86□□□□□ -2.27
CD46-215ENST00000488596 IMP4Q96G21 291 aaKnown RBP0.86□□□□□ -2.27
CD46-215ENST00000488596 SCGB3A1Q96QR1 104 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms