RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 AREGP15514 252 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 PSMB6P28072 239 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 SNCAP37840 140 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 OXA1LQ15070 435 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 IAH1Q2TAA2 248 aaPredicted RBP8.06□□□□□ -1.12
SKA1-204ENST00000488454 KHDC1LQ5JSQ8 128 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 GSG1LQ6UXU4 331 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 C11orf44Q8N8P7 122 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 OR10W1Q8NGF6 305 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 FAM110DQ8TAY7 271 aaPredicted RBP8.06□□□□□ -1.12
SKA1-204ENST00000488454 MS4A10Q96PG2 267 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 ZNF747Q9BV97 191 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 HIPK2Q9H2X6 1198 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 SLA2Q9H6Q3 261 aa8.06□□□□□ -1.12
SKA1-204ENST00000488454 CGB1A6NKQ9 187 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 FAM90A26D6RGX4 464 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 WRBO00258 174 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 NXPH3O95157 252 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 TRGV3P03979 118 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 REG1AP05451 166 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 CRYGCP07315 174 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 CD28P10747 220 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 HIST1H1BP16401 226 aaKnown RBP8.05□□□□□ -1.12
SKA1-204ENST00000488454 RAB9AP51151 201 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 SUB1P53999 127 aaKnown RBP eCLIP8.05□□□□□ -1.12
SKA1-204ENST00000488454 CFHR3Q02985 330 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 TNFRSF9Q07011 255 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 AARDQ4LEZ3 155 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 C19orf54Q5BKX5 351 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 SPINK9Q5DT21 86 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 ASPHD1Q5U4P2 390 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 C10orf99Q6UWK7 81 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 OR1L6Q8NGR2 347 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 HEYLQ9NQ87 328 aaPredicted RBP8.05□□□□□ -1.12
SKA1-204ENST00000488454 ZFP57Q9NU63 452 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 THYN1Q9P016 225 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 TSSC4Q9Y5U2 329 aaPredicted RBP8.05□□□□□ -1.12
SKA1-204ENST00000488454 ALG5Q9Y673 324 aa8.05□□□□□ -1.12
SKA1-204ENST00000488454 A0A0G2JLM5 398 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 A0A1B0GW64 132 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 IGLC7A0M8Q6 106 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 C7orf66A4D0T2 115 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 MPTX1A8MV57 137 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 CCSO14618 274 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 GOSR2O14653 212 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 PITX3O75364 302 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 CTRB1P17538 263 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 PSMB8P28062 276 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 NKX2-1P43699 371 aaPredicted RBP8.04□□□□□ -1.12
SKA1-204ENST00000488454 TPPP2P59282 170 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 WT1-ASQ06250 92 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 PDLIM3Q53GG5 364 aaPredicted RBP8.04□□□□□ -1.12
SKA1-204ENST00000488454 CTRB2Q6GPI1 263 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 SLC25A24Q6NUK1 477 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 WIPF2Q8TF74 440 aaPredicted RBP8.04□□□□□ -1.12
SKA1-204ENST00000488454 C2orf50Q96LR7 162 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 CITED2Q99967 270 aaPredicted RBP8.04□□□□□ -1.12
SKA1-204ENST00000488454 HSPB7Q9UBY9 170 aa8.04□□□□□ -1.12
SKA1-204ENST00000488454 FBN1P35555 2871 aaKnown RBP8.04□□□□□ -1.12
SKA1-204ENST00000488454 NUDT19A8MXV4 375 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 INS-IGF2F8WCM5 200 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 SOX15O60248 233 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 BRI3O95415 125 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 LY86O95711 162 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 SCGB1D2O95969 90 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 PRH1P02810 166 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 HTR2BP41595 481 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 KRTAP10-3P60369 221 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 RPP30P78346 268 aaKnown RBP8.03□□□□□ -1.12
SKA1-204ENST00000488454 CYCSP99999 105 aaKnown RBP8.03□□□□□ -1.12
SKA1-204ENST00000488454 CD83Q01151 205 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 ATP5G2Q06055 141 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 SRSF4Q08170 494 aaKnown RBP8.03□□□□□ -1.12
SKA1-204ENST00000488454 NOXA1Q86UR1 476 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 NDUFA11Q86Y39 141 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 WFDC3Q8IUB2 231 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 OR2C3Q8N628 320 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 RNF152Q8N8N0 203 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 ZBTB8BQ8NAP8 495 aaPredicted RBP8.03□□□□□ -1.12
SKA1-204ENST00000488454 DTD1Q8TEA8 209 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 MISP3Q96FF7 219 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 USMG5Q96IX5 58 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 OR10C1Q96KK4 312 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 CIB3Q96Q77 187 aaPredicted RBP8.03□□□□□ -1.12
SKA1-204ENST00000488454 CITED1Q99966 193 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 MED28Q9H204 178 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 KLK15Q9H2R5 256 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 RBKSQ9H477 322 aa8.03□□□□□ -1.12
SKA1-204ENST00000488454 F11RQ9Y624 299 aaKnown RBP8.03□□□□□ -1.12
SKA1-204ENST00000488454 A0A1W2PRX2 142 aa8.02□□□□□ -1.13
SKA1-204ENST00000488454 FAM223BA6NKX1 122 aa8.02□□□□□ -1.13
SKA1-204ENST00000488454 SYNGR2O43760 224 aa8.02□□□□□ -1.13
SKA1-204ENST00000488454 OR2J3O76001 311 aa8.02□□□□□ -1.13
SKA1-204ENST00000488454 IFNA10P01566 189 aa8.02□□□□□ -1.13
SKA1-204ENST00000488454 PF4P02776 101 aa8.02□□□□□ -1.13
SKA1-204ENST00000488454 CDX1P47902 265 aaPredicted RBP8.02□□□□□ -1.13
SKA1-204ENST00000488454 RHOGP84095 191 aa8.02□□□□□ -1.13
SKA1-204ENST00000488454 NSUN5P1Q3KNT7 163 aa8.02□□□□□ -1.13
SKA1-204ENST00000488454 TCTEX1D4Q5JR98 221 aa8.02□□□□□ -1.13
SKA1-204ENST00000488454 LCNL1Q6ZST4 164 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms