RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 HLA-AP01891 365 aaKnown RBP12.99□□□□□ -0.33
HMG20B-212ENST00000487894 SPNP16150 400 aa12.99□□□□□ -0.33
HMG20B-212ENST00000487894 ARL3P36405 182 aa12.99□□□□□ -0.33
HMG20B-212ENST00000487894 MECP2P51608 486 aaKnown RBP12.99□□□□□ -0.33
HMG20B-212ENST00000487894 DEFB121Q5J5C9 76 aa12.99□□□□□ -0.33
HMG20B-212ENST00000487894 SPANXN2Q5MJ10 180 aa12.99□□□□□ -0.33
HMG20B-212ENST00000487894 TOMM5Q8N4H5 51 aa12.99□□□□□ -0.33
HMG20B-212ENST00000487894 GLYATL2Q8WU03 294 aa12.99□□□□□ -0.33
HMG20B-212ENST00000487894 CXorf58Q96LI9 332 aa12.99□□□□□ -0.33
HMG20B-212ENST00000487894 SRRQ9GZT4 340 aa12.99□□□□□ -0.33
HMG20B-212ENST00000487894 THYN1Q9P016 225 aa12.99□□□□□ -0.33
HMG20B-212ENST00000487894 LSM4Q9Y4Z0 139 aaKnown RBP12.99□□□□□ -0.33
HMG20B-212ENST00000487894 TRBV7-1A0A0A6YYK4 115 aa12.98□□□□□ -0.33
HMG20B-212ENST00000487894 A0A0B4J293 547 aa12.98□□□□□ -0.33
HMG20B-212ENST00000487894 CYB5BO43169 146 aa12.98□□□□□ -0.33
HMG20B-212ENST00000487894 GGCTO75223 188 aaKnown RBP12.98□□□□□ -0.33
HMG20B-212ENST00000487894 ATG12O94817 140 aa12.98□□□□□ -0.33
HMG20B-212ENST00000487894 CDS2O95674 445 aa12.98□□□□□ -0.33
HMG20B-212ENST00000487894 LY86O95711 162 aa12.98□□□□□ -0.33
HMG20B-212ENST00000487894 CSN3P07498 182 aa12.98□□□□□ -0.33
HMG20B-212ENST00000487894 FAUP35544 74 aaKnown RBP12.98□□□□□ -0.33
HMG20B-212ENST00000487894 AP3S2P59780 193 aa12.98□□□□□ -0.33
HMG20B-212ENST00000487894 HSPE1P61604 102 aaKnown RBP12.98□□□□□ -0.33
HMG20B-212ENST00000487894 TATDN3Q17R31 274 aa12.98□□□□□ -0.33
HMG20B-212ENST00000487894 SLC25A24Q6NUK1 477 aa12.98□□□□□ -0.33
HMG20B-212ENST00000487894 ZNF502Q8TBZ5 544 aa12.98□□□□□ -0.33
HMG20B-212ENST00000487894 NDUFA13Q9P0J0 144 aa12.98□□□□□ -0.33
HMG20B-212ENST00000487894 DHODHQ02127 395 aa12.97□□□□□ -0.33
HMG20B-212ENST00000487894 DCTN2Q13561 401 aaKnown RBP12.97□□□□□ -0.33
HMG20B-212ENST00000487894 OR2C3Q8N628 320 aa12.97□□□□□ -0.33
HMG20B-212ENST00000487894 ZNF114Q8NC26 417 aa12.97□□□□□ -0.33
HMG20B-212ENST00000487894 VN1R17PQ8TDU5 208 aa12.97□□□□□ -0.33
HMG20B-212ENST00000487894 SIGLEC8Q9NYZ4 499 aa12.97□□□□□ -0.33
HMG20B-212ENST00000487894 PEMTQ9UBM1 199 aa12.97□□□□□ -0.33
HMG20B-212ENST00000487894 ST8SIA3O43173 380 aa12.96□□□□□ -0.33
HMG20B-212ENST00000487894 OR2C1O95371 312 aa12.96□□□□□ -0.33
HMG20B-212ENST00000487894 GP9P14770 177 aa12.96□□□□□ -0.33
HMG20B-212ENST00000487894 GPR183P32249 361 aa12.96□□□□□ -0.33
HMG20B-212ENST00000487894 SPINK9Q5DT21 86 aa12.96□□□□□ -0.33
HMG20B-212ENST00000487894 SELENOHQ8IZQ5 122 aaKnown RBP12.96□□□□□ -0.33
HMG20B-212ENST00000487894 OR1P1Q8NH06 330 aa12.96□□□□□ -0.33
HMG20B-212ENST00000487894 RNASE11Q8TAA1 199 aaKnown RBP12.96□□□□□ -0.33
HMG20B-212ENST00000487894 DEDD2Q8WXF8 326 aa12.96□□□□□ -0.33
HMG20B-212ENST00000487894 RBPMSQ93062 196 aaKnown RBP12.96□□□□□ -0.33
HMG20B-212ENST00000487894 RRNAD1Q96FB5 475 aaKnown RBP12.96□□□□□ -0.33
HMG20B-212ENST00000487894 GALNT14Q96FL9 552 aa12.96□□□□□ -0.33
HMG20B-212ENST00000487894 SCGB3A2Q96PL1 93 aa12.96□□□□□ -0.33
HMG20B-212ENST00000487894 PLEKHA3Q9HB20 300 aa12.96□□□□□ -0.33
HMG20B-212ENST00000487894 IGHV3-21A0A0B4J1V1 117 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 K7EIM0 57 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 LGALS9O00182 355 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 CLEC3BP05452 202 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 EDN2P20800 178 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 SUPT4H1P63272 117 aaKnown RBP12.95□□□□□ -0.34
HMG20B-212ENST00000487894 TMEM187Q14656 261 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 TMEM268Q5VZI3 342 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 ADAMTSL5Q6ZMM2 481 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 Q6ZRM9 215 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 GPHB5Q86YW7 130 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 FAM219AQ8IW50 185 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 SGPP2Q8IWX5 399 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 OR1L6Q8NGR2 347 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 B9D2Q9BPU9 175 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 ZC4H2Q9NQZ6 224 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 PRR13Q9NZ81 148 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 TMEM56-RWDD3S4R434 201 aa12.95□□□□□ -0.34
HMG20B-212ENST00000487894 F8W735 103 aaPredicted RBP12.94□□□□□ -0.34
HMG20B-212ENST00000487894 BAK1Q16611 211 aa12.94□□□□□ -0.34
HMG20B-212ENST00000487894 LINC01559Q495D7 138 aa12.94□□□□□ -0.34
HMG20B-212ENST00000487894 SLC35G3Q8N808 338 aa12.94□□□□□ -0.34
HMG20B-212ENST00000487894 SCARB1Q8WTV0 552 aa12.94□□□□□ -0.34
HMG20B-212ENST00000487894 SDHCQ99643 169 aaPredicted RBP12.94□□□□□ -0.34
HMG20B-212ENST00000487894 C2orf70A6NJV1 201 aa12.93□□□□□ -0.34
HMG20B-212ENST00000487894 A8MWP6 167 aa12.93□□□□□ -0.34
HMG20B-212ENST00000487894 INS-IGF2F8WCM5 200 aa12.93□□□□□ -0.34
HMG20B-212ENST00000487894 TGOLN2O43493 480 aa12.93□□□□□ -0.34
HMG20B-212ENST00000487894 IFNA17P01571 189 aa12.93□□□□□ -0.34
HMG20B-212ENST00000487894 AKR1C4P17516 323 aa12.93□□□□□ -0.34
HMG20B-212ENST00000487894 AARDQ4LEZ3 155 aa12.93□□□□□ -0.34
HMG20B-212ENST00000487894 ZNF57Q68EA5 555 aaPredicted RBP12.93□□□□□ -0.34
HMG20B-212ENST00000487894 IL22RA2Q969J5 263 aa12.93□□□□□ -0.34
HMG20B-212ENST00000487894 GPR146Q96CH1 333 aa12.93□□□□□ -0.34
HMG20B-212ENST00000487894 PDCD10Q9BUL8 212 aa12.93□□□□□ -0.34
HMG20B-212ENST00000487894 C21orf62Q9NYP8 219 aa12.93□□□□□ -0.34
HMG20B-212ENST00000487894 OR2T8A6NH00 312 aa12.92□□□□□ -0.34
HMG20B-212ENST00000487894 I3L2K1 104 aa12.92□□□□□ -0.34
HMG20B-212ENST00000487894 ERHP84090 104 aaKnown RBP12.92□□□□□ -0.34
HMG20B-212ENST00000487894 CD69Q07108 199 aa12.92□□□□□ -0.34
HMG20B-212ENST00000487894 PLET1Q6UQ28 207 aa12.92□□□□□ -0.34
HMG20B-212ENST00000487894 MISP3Q96FF7 219 aa12.92□□□□□ -0.34
HMG20B-212ENST00000487894 BSCL2Q96G97 398 aaPredicted RBP12.92□□□□□ -0.34
HMG20B-212ENST00000487894 ATP6V0BQ99437 205 aa12.92□□□□□ -0.34
HMG20B-212ENST00000487894 CACNG5Q9UF02 275 aa12.92□□□□□ -0.34
HMG20B-212ENST00000487894 KCNIP3Q9Y2W7 256 aa12.92□□□□□ -0.34
HMG20B-212ENST00000487894 TMEM213A2RRL7 107 aa12.91□□□□□ -0.34
HMG20B-212ENST00000487894 IZUMO1RA6ND01 250 aa12.91□□□□□ -0.34
HMG20B-212ENST00000487894 FOLR2P14207 255 aa12.91□□□□□ -0.34
HMG20B-212ENST00000487894 HOXA1P49639 335 aaPredicted RBP12.91□□□□□ -0.34
HMG20B-212ENST00000487894 FAM106AQ4KMX7 169 aa12.91□□□□□ -0.34
HMG20B-212ENST00000487894 TRIQKQ629K1 86 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms