RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 XCL2Q9UBD3 114 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 ARL2BPQ9Y2Y0 163 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 PRELID3BQ9Y3B1 194 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 NOP16Q9Y3C1 178 aaKnown RBP2.42□□□□□ -2.02
GPNMB-212ENST00000487890 NUBP2Q9Y5Y2 271 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 TMEM56-RWDD3S4R434 201 aa2.42□□□□□ -2.02
GPNMB-212ENST00000487890 IGHV3OR15-7A0A075B7D8 119 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 TRAV38-1A0A0B4J264 116 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 MDFIC2A0A1B0GVS7 189 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 A0A1W2PRF3 423 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 A0A1W2PRM7 423 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 DHRS12A0PJE2 317 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 FAM183AA6NL82 134 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 CD300LBA8K4G0 201 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 CENPXA8MT69 81 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF878C9JN71 531 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 SMKR1H3BMG3 65 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 TRAPPC2LH3BP13 241 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 M0QZK8 103 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 M0R036 132 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF593O00488 134 aaPredicted RBP2.41□□□□□ -2.02
GPNMB-212ENST00000487890 PHYHO14832 338 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 ATP6V1G2O95670 118 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 GYPAP02724 150 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 CD74P04233 296 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 HSPB1P04792 205 aaKnown RBP2.41□□□□□ -2.02
GPNMB-212ENST00000487890 OR8U9P0C7N5 309 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 P0C879 139 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 CD36P16671 472 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 GZMHP20718 246 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 OMGP23515 440 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 GATA2P23769 480 aaPredicted RBP2.41□□□□□ -2.02
GPNMB-212ENST00000487890 PRTN3P24158 256 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 COX7A1P24310 79 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 RPL5P46777 297 aaKnown RBP2.41□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF121P58317 390 aaPredicted RBP2.41□□□□□ -2.02
GPNMB-212ENST00000487890 TAS2R19P59542 299 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 FGF12P61328 243 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 GRB2P62993 217 aaKnown RBP2.41□□□□□ -2.02
GPNMB-212ENST00000487890 ELF3P78545 371 aaPredicted RBP2.41□□□□□ -2.02
GPNMB-212ENST00000487890 REG3AQ06141 175 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 MPPED2Q15777 294 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 HIGD2BQ4VC39 106 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 KLHL12Q53G59 568 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 GLYATL3Q5SZD4 288 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 OR2T5Q6IEZ7 315 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 LCN12Q6JVE5 192 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 DRAM2Q6UX65 266 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 LYPD2Q6UXB3 125 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 BRD3OSQ6XYD6 125 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 ZNF826PQ6ZT77 177 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 RASSF6Q6ZTQ3 369 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 NAA40Q86UY6 237 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 PDZD9Q8IXQ8 264 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 CEND1Q8N111 149 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 LINC00471Q8N535 108 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 ZDHHC22Q8N966 263 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 OR10G2Q8NGC3 310 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 OR51D1Q8NGF3 324 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 OR8D4Q8NGM9 314 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 OR13D1Q8NGV5 346 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 OR10K1Q8NGX5 313 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 OR10X1Q8NGY0 326 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 OR2T29Q8NH02 315 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 C7orf33Q8WU49 177 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 LRRC29Q8WV35 223 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 H1FXQ92522 213 aaKnown RBP2.41□□□□□ -2.02
GPNMB-212ENST00000487890 EEF1AKMT3Q96AZ1 226 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 SLAMF6Q96DU3 332 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 CENPNQ96H22 339 aaPredicted RBP2.41□□□□□ -2.02
GPNMB-212ENST00000487890 THTPAQ9BU02 230 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 CDCA4Q9BXL8 241 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 YTHDF1Q9BYJ9 559 aaKnown RBP2.41□□□□□ -2.02
GPNMB-212ENST00000487890 TTTY10Q9BZA0 68 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 OR51J1Q9H342 316 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 SLC2A9Q9NRM0 540 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 VNN3Q9NY84 501 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 TAS2R1Q9NYW7 299 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 C14orf166Q9Y224 244 aaKnown RBP2.41□□□□□ -2.02
GPNMB-212ENST00000487890 INSIG2Q9Y5U4 225 aa2.41□□□□□ -2.02
GPNMB-212ENST00000487890 SOX21Q9Y651 276 aaPredicted RBP2.41□□□□□ -2.02
GPNMB-212ENST00000487890 A0A0J9YXY3 114 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 C5orf63A6NC05 138 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 METTL15A6NJ78 407 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 LYRM9A8MSI8 78 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 BHLHE40O14503 412 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 FGF16O43320 207 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 MPZL2O60487 215 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 ORM1P02763 201 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 MRPL3P09001 348 aaKnown RBP2.4□□□□□ -2.03
GPNMB-212ENST00000487890 FBP1P09467 338 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 CHTF8P0CG12 524 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 SPI1P17947 270 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 FUT3P21217 361 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 S100PP25815 95 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 SSTR5P35346 364 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 CD200P41217 278 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 GABRA2P47869 451 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 RAB13P51153 203 aa2.4□□□□□ -2.03
GPNMB-212ENST00000487890 CCR6P51684 374 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms