RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 CDK9P50750 372 aaKnown RBP2.24□□□□□ -2.05
UBR3-211ENST00000487689 PPP1CAP62136 330 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 HPCAP84074 193 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 CDK5Q00535 292 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 MEF2CQ06413 473 aaPredicted RBP2.24□□□□□ -2.05
UBR3-211ENST00000487689 TNFRSF9Q07011 255 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 SKP2Q13309 424 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 ACOT6Q3I5F7 207 aaPredicted RBP2.24□□□□□ -2.05
UBR3-211ENST00000487689 ACSBG2Q5FVE4 666 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 ZNF684Q5T5D7 378 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 GLYATQ6IB77 296 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 DNAJC24Q6P3W2 148 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 SMARCD3Q6STE5 483 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 CYHR1Q6ZMK1 362 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 NEGR1Q7Z3B1 354 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 ZBTB8OSQ8IWT0 167 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 NATD1Q8N6N6 113 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 ZIC4Q8N9L1 334 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 C20orf203Q8NBC4 194 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 OR2M7Q8NG81 312 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 OR2Z1Q8NG97 314 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 OR51H1Q8NH63 302 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 OR1L1Q8NH94 360 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 MCFD2Q8NI22 146 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 SCGB1C1Q8TD33 95 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 KCTD4Q8WVF5 259 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 TWIST2Q8WVJ9 160 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 PATE1Q8WXA2 126 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 YIPF5Q969M3 257 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 EXOSC8Q96B26 276 aaKnown RBP2.24□□□□□ -2.05
UBR3-211ENST00000487689 BORCS7Q96B45 105 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 ZHX1-C8orf76Q96EF9 292 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 ACY3Q96HD9 319 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 OR2V2Q96R30 315 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 OR7D2Q96RA2 312 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 CCL19Q99731 98 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 HOPXQ9BPY8 73 aaPredicted RBP2.24□□□□□ -2.05
UBR3-211ENST00000487689 CMSS1Q9BQ75 279 aaKnown RBP2.24□□□□□ -2.05
UBR3-211ENST00000487689 ANAPC13Q9BS18 74 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 LXNQ9BS40 222 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 TMEM109Q9BVC6 243 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 RSPO3Q9BXY4 272 aaPredicted RBP2.24□□□□□ -2.05
UBR3-211ENST00000487689 C6orf62Q9GZU0 229 aaPredicted RBP2.24□□□□□ -2.05
UBR3-211ENST00000487689 MMP26Q9NRE1 261 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 ARMC1Q9NVT9 282 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 ANGPT4Q9Y264 503 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 PRELID3BQ9Y3B1 194 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 TIMM22Q9Y584 194 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 SLC22A7Q9Y694 548 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 NYNRINQ9P2P1 1898 aaKnown RBP2.24□□□□□ -2.05
UBR3-211ENST00000487689 SCN1AP35498 2009 aa2.24□□□□□ -2.05
UBR3-211ENST00000487689 FLG2Q5D862 2391 aaPredicted RBP2.23□□□□□ -2.05
UBR3-211ENST00000487689 VPS13DQ5THJ4 4388 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 TRAV17A0A0B4J275 112 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 FUOMA2VDF0 154 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 GOLGA6L4A6NEF3 574 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 NDUFC2-KCTD14E9PQ53 114 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 F5H5P2 479 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 TMEM250H0YL14 139 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 CHST10O43529 356 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 EIF1BO60739 113 aaKnown RBP2.23□□□□□ -2.05
UBR3-211ENST00000487689 STK16O75716 305 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 KLF7O75840 302 aaPredicted RBP2.23□□□□□ -2.05
UBR3-211ENST00000487689 YIF1AO95070 293 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 IFNA1P01562 189 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 IGLV2-23P01705 113 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 HMGN1P05114 100 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 ATP5G1P05496 136 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 CTSEP14091 401 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 HIST1H1TP22492 207 aaPredicted RBP2.23□□□□□ -2.05
UBR3-211ENST00000487689 EIF1P41567 113 aaKnown RBP2.23□□□□□ -2.05
UBR3-211ENST00000487689 CXCL5P42830 114 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 CRYBA4P53673 196 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 MP68P56378 58 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 RPS24P62847 133 aaKnown RBP2.23□□□□□ -2.05
UBR3-211ENST00000487689 BTN3A2P78410 334 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 CDK10Q15131 360 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 SSX1Q16384 188 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 ARHGAP11BQ3KRB8 267 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 HENMT1Q5T8I9 393 aaKnown RBP2.23□□□□□ -2.05
UBR3-211ENST00000487689 FAM78BQ5VT40 261 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 NXNL2Q5VZ03 156 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 SPATA31B1PQ5VZV4 182 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 CYB5R2Q6BCY4 276 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 ELP2Q6IA86 826 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 WDR59Q6PJI9 974 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 CEMP1Q6PRD7 247 aaPredicted RBP2.23□□□□□ -2.05
UBR3-211ENST00000487689 SHISA6Q6ZSJ9 500 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 GLT6D1Q7Z4J2 308 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 VN1R4Q7Z5H5 301 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 LINC00596Q86U02 117 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 CALHM3Q86XJ0 350 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 PHF13Q86YI8 300 aaPredicted RBP2.23□□□□□ -2.05
UBR3-211ENST00000487689 LYPD1Q8N2G4 141 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 TMEM86BQ8N661 226 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 ZNF433Q8N7K0 673 aaPredicted RBP2.23□□□□□ -2.05
UBR3-211ENST00000487689 ZNF676Q8N7Q3 588 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 C12orf29Q8N999 325 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 OR4X1Q8NH49 305 aa2.23□□□□□ -2.05
UBR3-211ENST00000487689 RASSF5Q8WWW0 418 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms