RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 OR52I2Q8NH67 350 aa14.34□□□□□ -0.11
CLIP2-206ENST00000487091 SCARB1Q8WTV0 552 aa14.34□□□□□ -0.11
CLIP2-206ENST00000487091 ZNF486Q96H40 463 aaPredicted RBP14.34□□□□□ -0.11
CLIP2-206ENST00000487091 MRPS26Q9BYN8 205 aaKnown RBP14.34□□□□□ -0.11
CLIP2-206ENST00000487091 C21orf62Q9NYP8 219 aa14.34□□□□□ -0.11
CLIP2-206ENST00000487091 IGHV3-35A0A0C4DH35 117 aa14.33□□□□□ -0.12
CLIP2-206ENST00000487091 RBMY1BA6NDE4 496 aaKnown RBP14.33□□□□□ -0.12
CLIP2-206ENST00000487091 RBMY1EA6NEQ0 496 aaKnown RBP14.33□□□□□ -0.12
CLIP2-206ENST00000487091 OR2T8A6NH00 312 aa14.33□□□□□ -0.12
CLIP2-206ENST00000487091 RBMY1DP0C7P1 496 aaKnown RBP14.33□□□□□ -0.12
CLIP2-206ENST00000487091 ALDH3B2P48448 385 aa14.33□□□□□ -0.12
CLIP2-206ENST00000487091 ANKRD55Q3KP44 614 aa14.33□□□□□ -0.12
CLIP2-206ENST00000487091 BTNL8Q6UX41 500 aa14.33□□□□□ -0.12
CLIP2-206ENST00000487091 OR1P1Q8NH06 330 aa14.33□□□□□ -0.12
CLIP2-206ENST00000487091 OR4A16Q8NH70 328 aa14.33□□□□□ -0.12
CLIP2-206ENST00000487091 ABHD1Q96SE0 405 aa14.33□□□□□ -0.12
CLIP2-206ENST00000487091 HIPK2Q9H2X6 1198 aa14.33□□□□□ -0.12
CLIP2-206ENST00000487091 SRD5A3Q9H8P0 318 aa14.33□□□□□ -0.12
CLIP2-206ENST00000487091 RYR3Q15413 4870 aa14.33□□□□□ -0.12
CLIP2-206ENST00000487091 K7EIM0 57 aa14.32□□□□□ -0.12
CLIP2-206ENST00000487091 CD3DP04234 171 aa14.32□□□□□ -0.12
CLIP2-206ENST00000487091 PGAM2P15259 253 aa14.32□□□□□ -0.12
CLIP2-206ENST00000487091 RNASE12Q5GAN4 147 aaKnown RBP14.32□□□□□ -0.12
CLIP2-206ENST00000487091 GPR141Q7Z602 305 aa14.32□□□□□ -0.12
CLIP2-206ENST00000487091 TMEM190Q8WZ59 177 aa14.32□□□□□ -0.12
CLIP2-206ENST00000487091 MRGPRFQ96AM1 343 aa14.32□□□□□ -0.12
CLIP2-206ENST00000487091 WFDC10AQ9H1F0 79 aa14.32□□□□□ -0.12
CLIP2-206ENST00000487091 F8W735 103 aaPredicted RBP14.31□□□□□ -0.12
CLIP2-206ENST00000487091 NDUFA4O00483 81 aa14.31□□□□□ -0.12
CLIP2-206ENST00000487091 HSPE1P61604 102 aaKnown RBP14.31□□□□□ -0.12
CLIP2-206ENST00000487091 PRCDQ00LT1 54 aa14.31□□□□□ -0.12
CLIP2-206ENST00000487091 OR2C3Q8N628 320 aa14.31□□□□□ -0.12
CLIP2-206ENST00000487091 TMEM229BQ8NBD8 167 aa14.31□□□□□ -0.12
CLIP2-206ENST00000487091 OR52B4Q8NGK2 314 aa14.31□□□□□ -0.12
CLIP2-206ENST00000487091 C5orf66Q9H5L9 145 aa14.31□□□□□ -0.12
CLIP2-206ENST00000487091 GAR1Q9NY12 217 aaKnown RBP14.31□□□□□ -0.12
CLIP2-206ENST00000487091 SELENOKQ9Y6D0 94 aa14.31□□□□□ -0.12
CLIP2-206ENST00000487091 IGHV3-21A0A0B4J1V1 117 aa14.3□□□□□ -0.12
CLIP2-206ENST00000487091 SCAF4O95104 1147 aaKnown RBP14.3□□□□□ -0.12
CLIP2-206ENST00000487091 CD74P04233 296 aa14.3□□□□□ -0.12
CLIP2-206ENST00000487091 PIGPP57054 158 aa14.3□□□□□ -0.12
CLIP2-206ENST00000487091 RBPMS2Q6ZRY4 209 aaKnown RBP14.3□□□□□ -0.12
CLIP2-206ENST00000487091 ZNF114Q8NC26 417 aa14.3□□□□□ -0.12
CLIP2-206ENST00000487091 TERB2Q8NHR7 220 aa14.3□□□□□ -0.12
CLIP2-206ENST00000487091 CHRDL1Q9BU40 450 aa14.3□□□□□ -0.12
CLIP2-206ENST00000487091 DAZ1Q9NQZ3 744 aaKnown RBP14.3□□□□□ -0.12
CLIP2-206ENST00000487091 GABARAPH6UMI1 98 aa14.29□□□□□ -0.12
CLIP2-206ENST00000487091 K7EMT4 169 aa14.29□□□□□ -0.12
CLIP2-206ENST00000487091 PI3P19957 117 aa14.29□□□□□ -0.12
CLIP2-206ENST00000487091 ADMP35318 185 aa14.29□□□□□ -0.12
CLIP2-206ENST00000487091 TAS2R19P59542 299 aa14.29□□□□□ -0.12
CLIP2-206ENST00000487091 SSBP1Q04837 148 aaKnown RBP14.29□□□□□ -0.12
CLIP2-206ENST00000487091 ZFAND1Q8TCF1 268 aa14.29□□□□□ -0.12
CLIP2-206ENST00000487091 MIXL1Q9H2W2 232 aa14.29□□□□□ -0.12
CLIP2-206ENST00000487091 I3L2K1 104 aa14.28□□□□□ -0.12
CLIP2-206ENST00000487091 ATG12O94817 140 aa14.28□□□□□ -0.12
CLIP2-206ENST00000487091 FCGR2BP31994 310 aaPredicted RBP14.28□□□□□ -0.12
CLIP2-206ENST00000487091 MRPS10P82664 201 aaKnown RBP14.28□□□□□ -0.12
CLIP2-206ENST00000487091 ERHP84090 104 aaKnown RBP14.28□□□□□ -0.12
CLIP2-206ENST00000487091 Q56UQ5 140 aa14.28□□□□□ -0.12
CLIP2-206ENST00000487091 UBAC2Q8NBM4 344 aa14.28□□□□□ -0.12
CLIP2-206ENST00000487091 TP53RKQ96S44 253 aa14.28□□□□□ -0.12
CLIP2-206ENST00000487091 TXN2Q99757 166 aa14.28□□□□□ -0.12
CLIP2-206ENST00000487091 SPAG8Q99932 426 aaPredicted RBP14.28□□□□□ -0.12
CLIP2-206ENST00000487091 RETNQ9HD89 108 aa14.28□□□□□ -0.12
CLIP2-206ENST00000487091 C3orf85A0A1B0GTC6 90 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 TSPAN4O14817 238 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 RGS5O15539 181 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 RAB3DO95716 219 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 IGKV1-5P01602 117 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 CTSGP08311 255 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 P0C879 139 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 MFAP4P55083 255 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 SPCS2Q15005 226 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 STEAP1BQ6NZ63 245 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 CCDC71LQ8N9Z2 235 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 OR4D10Q8NGI6 311 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 MISP3Q96FF7 219 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 COPZ2Q9P299 210 aa14.27□□□□□ -0.13
CLIP2-206ENST00000487091 C15orf62A8K5M9 175 aa14.26□□□□□ -0.13
CLIP2-206ENST00000487091 INS-IGF2F8WCM5 200 aa14.26□□□□□ -0.13
CLIP2-206ENST00000487091 CTDSP2O14595 271 aa14.26□□□□□ -0.13
CLIP2-206ENST00000487091 NUPL2O15504 423 aaKnown RBP14.26□□□□□ -0.13
CLIP2-206ENST00000487091 B3GALNT1O75752 331 aa14.26□□□□□ -0.13
CLIP2-206ENST00000487091 PPP5CP53041 499 aa14.26□□□□□ -0.13
CLIP2-206ENST00000487091 RELQ04864 619 aaPredicted RBP14.26□□□□□ -0.13
CLIP2-206ENST00000487091 ZFAND6Q6FIF0 208 aa14.26□□□□□ -0.13
CLIP2-206ENST00000487091 LAMTOR1Q6IAA8 161 aa14.26□□□□□ -0.13
CLIP2-206ENST00000487091 C20orf24Q9BUV8 137 aa14.26□□□□□ -0.13
CLIP2-206ENST00000487091 RABL2AQ9UBK7 228 aaPredicted RBP14.26□□□□□ -0.13
CLIP2-206ENST00000487091 RABL2BQ9UNT1 228 aa14.26□□□□□ -0.13
CLIP2-206ENST00000487091 MT-CO2P00403 227 aa14.25□□□□□ -0.13
CLIP2-206ENST00000487091 CTSDP07339 412 aaPredicted RBP14.25□□□□□ -0.13
CLIP2-206ENST00000487091 AKR1C2P52895 323 aa14.25□□□□□ -0.13
CLIP2-206ENST00000487091 MEF2DQ14814 521 aa14.25□□□□□ -0.13
CLIP2-206ENST00000487091 IZUMO4Q1ZYL8 232 aa14.25□□□□□ -0.13
CLIP2-206ENST00000487091 SCGB2B2Q4G0G5 96 aa14.25□□□□□ -0.13
CLIP2-206ENST00000487091 CLVS1Q8IUQ0 354 aaPredicted RBP14.25□□□□□ -0.13
CLIP2-206ENST00000487091 OR13C8Q8NGS7 320 aa14.25□□□□□ -0.13
CLIP2-206ENST00000487091 RAB2BQ8WUD1 216 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms