RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 OR5D18Q8NGL1 313 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 OR8S1Q8NH09 359 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 P2RX4Q99571 388 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 DHRS9Q9BPW9 319 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 ADAT1Q9BUB4 502 aaKnown RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 RTL8AQ9BWD3 113 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 MRPL37Q9BZE1 423 aaKnown RBP2.82□□□□□ -1.96
PTCD3-216ENST00000487043 TLNRD1Q9H1K6 362 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 BANF2Q9H503 90 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 TAAR3PQ9P1P4 343 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 DUX4Q9UBX2 424 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 SHPKQ9UHJ6 478 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 BSNQ9UPA5 3926 aa2.82□□□□□ -1.96
PTCD3-216ENST00000487043 CADP27708 2225 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 DIDO1Q9BTC0 2240 aaKnown RBP2.81□□□□□ -1.96
PTCD3-216ENST00000487043 ZNF462Q96JM2 2506 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 DEFB108AA8MXU0 73 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 F5H5P2 479 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 KRTAP4-16G5E9R7 235 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-216ENST00000487043 GABARAPH6UMI1 98 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 C19orf84I3L1E1 186 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 SULT1C2O00338 296 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 CDIPTO14735 213 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 BET1O15155 118 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 SOCS1O15524 211 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 SYNGR1O43759 233 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 ORC5O43913 435 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 CA11O75493 328 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 RBBP9O75884 186 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 IGHV1-46P01743 117 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 GLAP06280 429 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 PGA5P0DJD9 388 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 IL7P13232 177 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 ERP29P30040 261 aaKnown RBP2.81□□□□□ -1.96
PTCD3-216ENST00000487043 BLVRBP30043 206 aaPredicted RBP2.81□□□□□ -1.96
PTCD3-216ENST00000487043 PRSS3P35030 304 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 CFHR2P36980 270 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 PMELP40967 661 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 SRP9P49458 86 aaKnown RBP2.81□□□□□ -1.96
PTCD3-216ENST00000487043 FGF12P61328 243 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 IFITM2Q01629 132 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 SSBP1Q04837 148 aaKnown RBP2.81□□□□□ -1.96
PTCD3-216ENST00000487043 MADCAM1Q13477 382 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 MPPED2Q15777 294 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 TAF9Q16594 264 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 CDNFQ49AH0 187 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 STUMQ69YW2 141 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 WDR82Q6UXN9 313 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 LINC00173Q6ZV60 143 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 SNX29P2Q8IUI4 249 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 Q8IYB0 196 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 FAM58AQ8N1B3 248 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 CHST4Q8NCG5 386 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 C19orf18Q8NEA5 215 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 OR2Z1Q8NG97 314 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 OR10AD1Q8NGE0 317 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 OR10G9Q8NGN4 311 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 OR10K1Q8NGX5 313 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 OR10Z1Q8NGY1 313 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 LINC01006Q8NI28 216 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 SMIM4Q8WVI0 70 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 DEDD2Q8WXF8 326 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 IL22RA2Q969J5 263 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 YIPF5Q969M3 257 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 EEF1AKMT3Q96AZ1 226 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 SEH1LQ96EE3 360 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 ABCB10Q9NRK6 738 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 RASL12Q9NYN1 266 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 ST3GAL6Q9Y274 331 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 RBMX2Q9Y388 322 aaKnown RBP2.81□□□□□ -1.96
PTCD3-216ENST00000487043 FLNCQ14315 2725 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 CHD6Q8TD26 2715 aa2.81□□□□□ -1.96
PTCD3-216ENST00000487043 UBR5O95071 2799 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-216ENST00000487043 ANKHD1Q8IWZ3 2542 aaKnown RBP2.8□□□□□ -1.96
PTCD3-216ENST00000487043 PLCE1Q9P212 2302 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 IGHV3-64DA0A0J9YX35 117 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 ANKRD20A5PA0PJZ0 165 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 TMEM235A6NFC5 223 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 LYRM9A8MSI8 78 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 SERPINE3A8MV23 424 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 H7C417 338 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 M0R233 179 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 MFNGO00587 321 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 GEMIN2O14893 280 aaKnown RBP2.8□□□□□ -1.96
PTCD3-216ENST00000487043 DEGS1O15121 323 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 SIVA1O15304 175 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 PLA2G10O15496 165 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 PDCD6O75340 191 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 OR7C1O76099 320 aaPredicted RBP2.8□□□□□ -1.96
PTCD3-216ENST00000487043 LHBP01229 141 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 SERPINE2P07093 398 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 CD3GP09693 182 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 PTHLHP12272 177 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 HIST1H1DP16402 221 aaKnown RBP2.8□□□□□ -1.96
PTCD3-216ENST00000487043 CTRB1P17538 263 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 PRKACAP17612 351 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 RCVRNP35243 200 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 HRH1P35367 487 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 CBX5P45973 191 aa2.8□□□□□ -1.96
PTCD3-216ENST00000487043 INPP1P49441 399 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms