RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 RNASE6Q93091 150 aaKnown RBP14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 WFIKKN1Q96NZ8 548 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 DERL1Q9BUN8 251 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 CACNA1BQ00975 2339 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 NDUFB3O43676 98 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 PRR30Q53SZ7 412 aaPredicted RBP14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 SPATA31B1PQ5VZV4 182 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 H1FXQ92522 213 aaKnown RBP14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 PRORYQ9H606 182 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 NGBQ9NPG2 151 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 GSN-AS1Q9NRJ2 163 aa14.64□□□□□ -0.07
PDLIM7-207ENST00000486828 TMEM238LA0A1B0GVL6 79 aa14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 PPP5D1E7EU14 171 aa14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 GGCTO75223 188 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 LINC00869P0C866 280 aa14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 TMEM177Q53S58 311 aa14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 LRRC10Q5BKY1 277 aa14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 GFI1BQ5VTD9 330 aa14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 LYPD2Q6UXB3 125 aa14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 TMEM144Q7Z5S9 345 aa14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 OR5T1Q8NG75 326 aa14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 OR1L8Q8NGR8 309 aa14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 HARBI1Q96MB7 349 aa14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 SLC45A2Q9UMX9 530 aa14.63□□□□□ -0.07
PDLIM7-207ENST00000486828 SHISA9B4DS77 424 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 FAM71F2Q6NXP2 309 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 ZGRF1Q86YA3 2104 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 C8orf31Q8N9H6 132 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 ZNF596Q8TC21 504 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 PCGF1Q9BSM1 259 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 GPR61Q9BZJ8 451 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 YTHDF2Q9Y5A9 579 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 A0A1W2PPQ1 181 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 MT-CO2P00403 227 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 RNASE2P10153 161 aaKnown RBP14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 CHRNA7P36544 502 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 FAM3BP58499 235 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 KCNIP4Q6PIL6 250 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 DMRTC2Q8IXT2 367 aaPredicted RBP14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 OR2T10Q8NGZ9 312 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 TMEM204Q9BSN7 226 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 DYNLRB1Q9NP97 96 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 CTSZQ9UBR2 303 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 MIOXQ9UGB7 285 aa14.62□□□□□ -0.07
PDLIM7-207ENST00000486828 SCO2A0A1W2PP80 73 aa14.61□□□□□ -0.07
PDLIM7-207ENST00000486828 E7EQL1 145 aa14.61□□□□□ -0.07
PDLIM7-207ENST00000486828 TYMSP04818 313 aa14.61□□□□□ -0.07
PDLIM7-207ENST00000486828 RBPJQ06330 500 aa14.61□□□□□ -0.07
PDLIM7-207ENST00000486828 PYY3Q5JQD4 70 aa14.61□□□□□ -0.07
PDLIM7-207ENST00000486828 LINC00311Q8N616 119 aa14.61□□□□□ -0.07
PDLIM7-207ENST00000486828 FLYWCH2Q96CP2 140 aaKnown RBP14.61□□□□□ -0.07
PDLIM7-207ENST00000486828 PITPNC1Q9UKF7 332 aa14.61□□□□□ -0.07
PDLIM7-207ENST00000486828 DVL1O14640 695 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 FOXH1O75593 365 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 CLEC12BQ2HXU8 276 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 PDZD11Q5EBL8 140 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 MOB3BQ86TA1 216 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 ZNF114Q8NC26 417 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 OR4P4Q8NGL7 312 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 OR10X1Q8NGY0 326 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 TMEM186Q96B77 213 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 SLC35E1Q96K37 410 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 COMMD5Q9GZQ3 224 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 NDUFA4L2Q9NRX3 87 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 KAAG1Q9UBP8 84 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 RP1L1Q8IWN7 2480 aaPredicted RBP14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 TRBV20OR9-2A0A075B6H5 130 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 LOXP28300 417 aaPredicted RBP14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 CHRNB4P30926 498 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 REG1BP48304 166 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 BPIFB3P59826 476 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 RPL8P62917 257 aaKnown RBP14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 GAMTQ14353 236 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 FAM78BQ5VT40 261 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 PDPNQ86YL7 162 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 OR10W1Q8NGF6 305 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 OR10D4PQ8NGN7 298 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 OR4A5Q8NH83 315 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 NABP2Q9BQ15 211 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 AURKAIP1Q9NWT8 199 aaPredicted RBP14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 FUT9Q9Y231 359 aa14.6□□□□□ -0.07
PDLIM7-207ENST00000486828 IGKV1OR2-108A0A075B7D4 117 aa14.59□□□□□ -0.07
PDLIM7-207ENST00000486828 INS-IGF2F8WCM5 200 aa14.59□□□□□ -0.07
PDLIM7-207ENST00000486828 USF1P22415 310 aaPredicted RBP14.59□□□□□ -0.07
PDLIM7-207ENST00000486828 DLX6P56179 175 aa14.59□□□□□ -0.07
PDLIM7-207ENST00000486828 LCN2P80188 198 aa14.59□□□□□ -0.07
PDLIM7-207ENST00000486828 CD69Q07108 199 aa14.59□□□□□ -0.07
PDLIM7-207ENST00000486828 MIR17HGQ75NE6 70 aa14.59□□□□□ -0.07
PDLIM7-207ENST00000486828 OR4C13Q8NGP0 309 aa14.59□□□□□ -0.07
PDLIM7-207ENST00000486828 C11orf52Q96A22 123 aa14.59□□□□□ -0.07
PDLIM7-207ENST00000486828 IMMP2LQ96T52 175 aa14.59□□□□□ -0.07
PDLIM7-207ENST00000486828 PGPEP1LA6NFU8 196 aa14.58□□□□□ -0.07
PDLIM7-207ENST00000486828 VSTM2AQ8TAG5 236 aa14.58□□□□□ -0.07
PDLIM7-207ENST00000486828 TMEM167AQ8TBQ9 72 aa14.58□□□□□ -0.07
PDLIM7-207ENST00000486828 ST6GALNAC6Q969X2 333 aa14.58□□□□□ -0.07
PDLIM7-207ENST00000486828 SFRP2Q96HF1 295 aa14.58□□□□□ -0.07
PDLIM7-207ENST00000486828 VKORC1Q9BQB6 163 aa14.58□□□□□ -0.07
PDLIM7-207ENST00000486828 CHODLQ9H9P2 273 aa14.58□□□□□ -0.07
PDLIM7-207ENST00000486828 ARL2-SNX15V9GYD0 113 aa14.58□□□□□ -0.07
PDLIM7-207ENST00000486828 A0A087X0M5 115 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms